Gene Rpal_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2175 
Symbol 
ID6409835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2355561 
End bp2356118 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content66% 
IMG OID642712059 
Producthypothetical protein 
Protein accessionYP_001991171 
Protein GI192290566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0615204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCAA TTCGGTTCGC CGCGGCGCTG ATCATGGCCG TGGTGTTGGT CTCTCCGGCC 
TCGGCCGCGG TGTCCGATCG CGGCCGCGAC ACGGAGATTC AGGCACCGGC CGTGAGTCCG 
AGCGACGAGC CGACCGGTCC ATTGACGATC GCGCCCGGCA GCGGCGCGGA CCTGATCCGG 
ATGGTGGAGA GGAAACTGCC AGGCGCGCGG GTTTATGATC TCAACCTGAG CGACGAAGGC 
GCGGTACCGT GGTTCGAGGT TAAGGCGTAT CGGGCAGGGC AGGTGTGGAG CACCATGATC 
GATGCCGCCA CGCGTCGGAT CGTTCGCTCG CCTGACGCCA AGCCTGCTTC CGACCTCGAC 
CCGGAGACCC AGCGCGACCT CGGCGATTTC CGGCGGATCA AGATGAAGCT GTCCGAAGCG 
GTGGTGATCG CCGAGCAGCT CGGTGGTGGG CGCGCGGTCA GCGCCGGACT GCATCGCGGC 
GAAGACAAGC TGGTGTTCGT GGTCGTGGTG GTGTCGAACG GCGCGCTCAA AGAGATCACC 
GTCGAGCCGG ACAAGTAG
 
Protein sequence
MSAIRFAAAL IMAVVLVSPA SAAVSDRGRD TEIQAPAVSP SDEPTGPLTI APGSGADLIR 
MVERKLPGAR VYDLNLSDEG AVPWFEVKAY RAGQVWSTMI DAATRRIVRS PDAKPASDLD 
PETQRDLGDF RRIKMKLSEA VVIAEQLGGG RAVSAGLHRG EDKLVFVVVV VSNGALKEIT 
VEPDK