Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2156 |
Symbol | |
ID | 6409816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2335366 |
End bp | 2336097 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642712040 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001991152 |
Protein GI | 192290547 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.695514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCGC GCGCCCGCCC CACTCCGAAC GAGACGCCTG CCGAGCCCGA GCTCGGCATC ATGCGGCTCG CGCCGGAGAC CAGCTTCAAG ACCAAGGCCT ACGAGGCGCT GAAGCAGGCG ATCCTGAAGA TGGACATCTA CACCACGCCC GAGCCGGTGA TGCTCGACGA GCGCGCGCTG TCCGACAAGC TCGGCGTCAG CCGCACGCCG ATCCGTGAAG CGATCGCGAT GCTCGAACAG GAAGGGCTGG TGAAGGCGGT GCCGCGCCGG GGCATCATCG TGGTGCGCCG GACCAAGGCG GAAATCGTCG ACATGATCCG CGCCTGGGCG GCGCTGGAGA GCATGGCGGC GCGGCTGATC ACCATCGTGG CCCGCAAACG CGACATCGCC GCGCTGCGTG ACGTGTTCAA GGAGTTCGGT CCCGACCGGC TGCCGCAGGA TCACATCGAG GAATATTCCC GCGCCAACAT CGTGTTCCAC CAAACGCTGA TCTCGCTCAG CGAGTCACCG GTGCTGGTCG ACATGACCAA CGACATCCTG ATCCACGTTC GCGGCTATCG CCAGCTCACC ATCGGCCGCA AGGAGCGCAT CGCCGCCTCA CTGCCCGAGC ATCTGGCGAT GATCGAGGCG CTGGAAACAC GCGACACCGA ACTCGCCGAA AAGCTGGCGC GCGATCACAC GCTGCGGCTG GCTGCTTACG TCGAGACCCA CGGCCAGGAG CTGTTCGCCT GA
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Protein sequence | MIARARPTPN ETPAEPELGI MRLAPETSFK TKAYEALKQA ILKMDIYTTP EPVMLDERAL SDKLGVSRTP IREAIAMLEQ EGLVKAVPRR GIIVVRRTKA EIVDMIRAWA ALESMAARLI TIVARKRDIA ALRDVFKEFG PDRLPQDHIE EYSRANIVFH QTLISLSESP VLVDMTNDIL IHVRGYRQLT IGRKERIAAS LPEHLAMIEA LETRDTELAE KLARDHTLRL AAYVETHGQE LFA
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