| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2146 |
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| Symbol | |
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| ID | 6409806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2318997 |
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| End bp | 2320019 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642712030 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001991142 |
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| Protein GI | 192290537 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCCC TTCCCCGACT CTATTACGTC ACCTCCGGCC TCGACGAGGC CAACGCGTTC
GCGACCTGGC GTGCGGTGAT CTCACCGCTG TTCGAGCCGC GGCCCTGCGG GCCGAGCCGG
AAGACGCCGA CCGGATCGGC CTACGGCATC ATCATCGGCG ACCTGGTGGT CGCCAAGGTT
GCGTTCAACG CCCAGGATTT CGTCCGCGAC GCCCAGCGCA TCGCGGTGAC GCCGGATCAC
CTGCTGCTGC ACCTCTACGT GTCCGGCGGC TTCAACGGTG AAGTGACGCG GCAGCAGACC
GTGATCGGCC CCGGCAAGGT GGCGCTGATC GATCTTGCCT GCCCGCTCTC GACCCGCGCG
TTCGCGTCGA ACACGATGTG CCTGATCGTG CCGCGCAAGC TGCTCGCGGG GCTGCCGCTG
GACGCGCTCA AGCCGAAGCT CGATCCGCTG CGCAACGACC TGCTCGCGGC CTATATCCGC
TCGCTGCAGG AGCGCAGCGC GCAGCTCACC GAGGCCGACG TGGCGACGAC GGTGGCGGAG
ACCGCCGATT TCCTGCGCCG CCTGCTGGCA CCGTCCGCCG AGGCCGACCT CGCCCCTGAG
CGCAGCGCCG ACGAGACCAT TCTGGCGCTG ACCGAGGCGC TGATCCGCGA CAACCTCGCG
CTGCCGGAAC TGTCGCCTGA CTGGCTGGCG CAGCAACTCG ACGTGTCGCG CGCCTCGCTG
TACCGGCTGT TCGCCGATCG CGGCGGGGTG ATGCGTTATG TCCAGGAACG CCGGCTGCTC
GCGGTCCAGG CCGCGCTCGC CGATCCGCTG GAGACGCGGC GGCTGTCGCG CCTCGCTTCC
GATCTCGGCT TCAAGAGCGA GGCGCATTTC AGCCGCTCGT TCCGCGCCCG TTTCGGCATC
ACCGCCAGCG CCTATCGCAA GGCACAGCTC GATGCCTCGG CCGCGATCCA GCTCACCAGC
CCCGCAGTGG TGCAGCAATG GTGGACCGCT GTCGCGCGCG ATCCGCTCCG GCACGCCGGC
TGA
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| Protein sequence | MASLPRLYYV TSGLDEANAF ATWRAVISPL FEPRPCGPSR KTPTGSAYGI IIGDLVVAKV
AFNAQDFVRD AQRIAVTPDH LLLHLYVSGG FNGEVTRQQT VIGPGKVALI DLACPLSTRA
FASNTMCLIV PRKLLAGLPL DALKPKLDPL RNDLLAAYIR SLQERSAQLT EADVATTVAE
TADFLRRLLA PSAEADLAPE RSADETILAL TEALIRDNLA LPELSPDWLA QQLDVSRASL
YRLFADRGGV MRYVQERRLL AVQAALADPL ETRRLSRLAS DLGFKSEAHF SRSFRARFGI
TASAYRKAQL DASAAIQLTS PAVVQQWWTA VARDPLRHAG
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