| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2107 |
|---|
| Symbol | |
|---|
| ID | 6409767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2278547 |
|---|
| End bp | 2278867 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642711992 |
|---|
| Product | phage head-tail adaptor |
|---|
| Protein accession | YP_001991104 |
|---|
| Protein GI | 192290499 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5614] Bacteriophage head-tail adaptor |
|---|
| TIGRFAM ID | [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000913965 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGATC CCGGCCGCCT CAACCGCCGG CTGACGCTGT TGGCGCCGGT CGAGACCGAC
GACGGGCAGG GCGGCGTGGT GCGGAGTTTT GCGGCGCAGG CGGTGCTGTG GGCCAGCGTC
GTGCCGCTCG CCGCGCGCGA GGGCGTCGCG GCCGATCAAG ATCGTGCGGC GCTGCGCGCG
AAAATCACGC TGCGCGCCGG GGTGGCGCTG TCGCGGGCGC ATCGGCTCGC CGATGGCGAC
AGTGCGTATC GCATCATCGC CTGGCGCAGC CGCGAGCGCG GCGCGCTGCT CGAGATCGAC
GCCGAAACGG AGCAGACATG A
|
|---|
| Protein sequence | MIDPGRLNRR LTLLAPVETD DGQGGVVRSF AAQAVLWASV VPLAAREGVA ADQDRAALRA
KITLRAGVAL SRAHRLADGD SAYRIIAWRS RERGALLEID AETEQT
|
|---|
| |