Gene Rpal_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2099 
Symbol 
ID6409759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp2272138 
End bp2273175 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content57% 
IMG OID642711984 
ProductAppr-1-p processing domain protein 
Protein accessionYP_001991096 
Protein GI192290491 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000167345 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA GGCTAGTGAC GGGCAACCTA CTGGAGCGGC GCGTCGACGC GATCGTCAAC 
ACGGTCAACA CTGTCGGCGT GATGGGCAAA GGAATTGCCC TGCAGTTCAA GCGCAAATGG 
CCGGCGAATG CCAAAGCCTA CGAAGCGGCC TGCAAGCGCG GCGAAGTCGT TCCCGGTAAG 
ATGTTCGTGT TCGACAATGG CGGCCTCATC GCACCAAAGT TCATCATCAA TTTCCCAACC 
AAACGGCACT GGCGACAACC GTCGCGAATG GCAGACATCG AAGCTGGACT GGTCGATTTA 
ATCGTCCAGA TCCGGCACCT GCAGATTCGA TCAATTGCGC TCCCCCCGCT CGGCTGTGGA 
AATGGTGGTC TCGACTGGGA CCAAGTGCGC CCAAAAATCG AGGCAGCCTT CCGAGAGTTG 
CCGGACGTAG ACGTCGAGCT TTTCGCACCC GCAGAGGCAG CTGGCGTTCG CCAACTCGAG 
CCGGAAGCAC AGAAGCCGCG GATGACTCCC GGCCGTGCTG CGATTCTGAA ACTACTCTCA 
ATATACCGCG AAATGCGCTA TCCGCTAAGT CAGATCGAGA TTCAAAAGCT CGTCTATTTC 
CTGGCAAGCG CCGGCCAGGC AATGGGTAGT CTGACGTTCA AGAAACACAT TTATGGCCCC 
TACGCACCCG AGCTGCGCCA CGTCCTGACG AAGATGGATG GTGCATATCT ACATGGGGTC 
GGCGATGGCT CTAAGCCTTC CGAGATAACG GTGGTCGGTG AGGCACTTCG AGAGGCGGAA 
GCTTTCCTCA ACTCCCACCA GGACTTTGAA ACCGTGCGAC GCGTCGAGCA GATTGCGCGG 
CTGATCGACG GGTTCGAAAC ACCTTACGGC ATGGAGTTGC TCGCCACGGT GCATTGGACC 
GCGAACGAGA CAAAAACGAC AGATCTAAAC CGGATCGTCG AAGCTGTTCA TAGCTGGAAC 
GAGCGTAAAC GCCAGATTAT GCTGCCCGCG AACATCAAGT CGGCTCGTGA CCGGTTGGTG 
ACTGAACAGT GGCTGTAA
 
Protein sequence
MAIRLVTGNL LERRVDAIVN TVNTVGVMGK GIALQFKRKW PANAKAYEAA CKRGEVVPGK 
MFVFDNGGLI APKFIINFPT KRHWRQPSRM ADIEAGLVDL IVQIRHLQIR SIALPPLGCG 
NGGLDWDQVR PKIEAAFREL PDVDVELFAP AEAAGVRQLE PEAQKPRMTP GRAAILKLLS 
IYREMRYPLS QIEIQKLVYF LASAGQAMGS LTFKKHIYGP YAPELRHVLT KMDGAYLHGV 
GDGSKPSEIT VVGEALREAE AFLNSHQDFE TVRRVEQIAR LIDGFETPYG MELLATVHWT 
ANETKTTDLN RIVEAVHSWN ERKRQIMLPA NIKSARDRLV TEQWL