| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2079 |
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| Symbol | |
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| ID | 6409739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2249369 |
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| End bp | 2250583 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711965 |
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| Product | branched chain amino acid transport system substrate binding protein |
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| Protein accession | YP_001991077 |
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| Protein GI | 192290472 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCAA CCAACGGCCT GCTCGGCCTC GCGGCCGCGT GCCTGTTGTG CGGCACTGCC
AACGCCGAGA TTTCCGGCAA TGTCGTGCGC GTCGGCGTGC TCAACGACAT TTCCGGCATT
TTCCAAGATA CCAACGGCAT GGGCTCGGTC GAAGCGGCAC GGATGGCGGC CGAAGACTTC
GCCGGCGGCG GCAAGAACAT CAAGGTCGAG ATCGTCTATG CCGATCACCA GAACAAGGCC
GACGTCGGCA ACGCCATCGC CCGCCGCTGG CTCGACAACG AGGGCGTCGA CGCGATCGTC
GACGTGCCGA ATTCGGCGGT CGGGCTGTCG ATCAACACGC TGCTGCGCGG CACCAAGATG
ACGTTCCTGG CGTCGTCGAC GGCGAGCTCC GATCTCACCG GCAAGGCCTG CTCTCCCAAC
ACCATCCAGT GGGTCAACGA CACCTGGGCG ACCGGCAACA CCACTGCCGC GGCAATGATG
CAGCGTGGCG GCAAGGACTG GTACTTCATC ACGGTGGATT ACGCGCTCGG CAAGGGCATC
GAAGCCGAAG CCGCCAAGTA CATCGAGGCG CATGGCGGCA AGGTGCTCGG CTCGGCCAAG
CATCCGCTCG GCACGTCGGA CTTCGCCTCG TTCCTGCTGC AGGCGCAATC TTCGAAGGCG
GGCGTGATCG GCCTCGCCAA TGCCGGCGGC GACACCATCA ACAGCGTCAA GCAGGGGGCC
GAATTCGGCA TTCAGCAGAG CGGGCAGAAG CTCGTCGCGT TCCTATTGTT CATCAACGAT
ATCCACGGCA TGGGCCTGAA GGTGGCACAG GGCCTGCAGC TGATGGAAGC GTTCTACTGG
GACATGAACG ACGACACCCG CGCTTTCGCC AAGCGGTTCG CGCAGCGGCC CGGCATGAAC
GGCAAGATGC CGAGCGGCAA CCAGGCCGGC GTCTACGCCT CGACGCTGGC GTATCTTAAC
GCCGTCGCGG CTACCGGAAG CGATGACGCC AAGGACGTCG TGCCGCAGAT GAAAAAGTTC
AGCGGCAAGG ACAAGCTGTT CGGCGACGTC ACCATCCGGC AGGACGGACG CGTCGTGCAC
CCGATGTATC TGTTCGAGGT GAAGAAGCCG GAGGAGTCGA AGTATCCTTA CGACTACTAT
CGCCTGGTTT CGACCATCGC CGCCGACAAG GCGTTCCGCC CGATAGCCGA GGGTGGGTGC
GAGTTGGCGA AGTAG
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| Protein sequence | MTPTNGLLGL AAACLLCGTA NAEISGNVVR VGVLNDISGI FQDTNGMGSV EAARMAAEDF
AGGGKNIKVE IVYADHQNKA DVGNAIARRW LDNEGVDAIV DVPNSAVGLS INTLLRGTKM
TFLASSTASS DLTGKACSPN TIQWVNDTWA TGNTTAAAMM QRGGKDWYFI TVDYALGKGI
EAEAAKYIEA HGGKVLGSAK HPLGTSDFAS FLLQAQSSKA GVIGLANAGG DTINSVKQGA
EFGIQQSGQK LVAFLLFIND IHGMGLKVAQ GLQLMEAFYW DMNDDTRAFA KRFAQRPGMN
GKMPSGNQAG VYASTLAYLN AVAATGSDDA KDVVPQMKKF SGKDKLFGDV TIRQDGRVVH
PMYLFEVKKP EESKYPYDYY RLVSTIAADK AFRPIAEGGC ELAK
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