| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2066 |
|---|
| Symbol | |
|---|
| ID | 6409726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2237801 |
|---|
| End bp | 2238775 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642711952 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001991064 |
|---|
| Protein GI | 192290459 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC TCACACCCTT TCCCGGATAC GACGGGCTGA TGTCGCTGTC GCGCCGCGAA
GGCGTCGACA TTCGCCCGAC GCTGCTCAGG GTGCTGACCG ATCTGTATGT GCAGAGCCCG
TCGCATACCG ACGAGGAAGA GCGGCAGTTC GTCGAACTGA CGTCGCGGCT GATCGACGAG
GTCGACGACG CCACCCGCGC GGTGGTACGC GCCCGGCTGT CGATCTATCC GCACACCCCT
CGCGCGATCG CGCTGCGGCT GTCGCTGTCG TCATCGACTG ATCAGCGGGT CCCGCTGGCG
GCACCGATTC CGCCGGCTGA TACCACCGCC CCGGCGCGGC CGGCATCGCG CATTCCGACC
GAAGCCGAAC AGCGCGCCGC CAGCCTGTCG ATGCAGCCGG AAGACGCTGC GCAGCTGTCC
GAGATGTTCT TCTCCGCAGC CTCACAGGAG CGGACGCAGA TCCTGTACAA TCTCGCCGAG
ACGCCGCTGC GCCCGGCGGC ACGGATTCAT CCGCCGCGGG CGATGCGCGC GATCGAAGTT
CTGCACATGG CAGCCTATGT GTCGGACGTC GAGAACTTCA CCGCCGAGCT GGGTGACGCG
CTACTACTCA CCGCGACAAC GGCCGAGCGC GTCGTTTTCG ATGAAGGCGG CGAAGCGCTC
GCCTGTGCGC TGAAGGCCCT CGGCATCAAG AGCCAGGTGT TCGAGCAGGT ACTGATGTTC
CTCGATCCCG CCAAGGGCTC GTCGGTCGAT TGGGTGTACC GACTGTCGCG GCTGTACGAT
CGCTTGAGCG AACGCGCCGC GTTGATCATG CTGGCAGCGT GGCGCGGTGC CACCGTTGCT
TCCACCCGCG CCAAATATCG CGCAGCGCTC TACGACGATG AGCGTCAGCG CGCGCGCAGC
GCGACGCCGC AGGCCCGCCC CGCGGTGCAG CCCGGTGCCG CCTGGACGCC GCGCACCAAT
ACGACGCGCG GCTAA
|
|---|
| Protein sequence | MTTLTPFPGY DGLMSLSRRE GVDIRPTLLR VLTDLYVQSP SHTDEEERQF VELTSRLIDE
VDDATRAVVR ARLSIYPHTP RAIALRLSLS SSTDQRVPLA APIPPADTTA PARPASRIPT
EAEQRAASLS MQPEDAAQLS EMFFSAASQE RTQILYNLAE TPLRPAARIH PPRAMRAIEV
LHMAAYVSDV ENFTAELGDA LLLTATTAER VVFDEGGEAL ACALKALGIK SQVFEQVLMF
LDPAKGSSVD WVYRLSRLYD RLSERAALIM LAAWRGATVA STRAKYRAAL YDDERQRARS
ATPQARPAVQ PGAAWTPRTN TTRG
|
|---|
| |