| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2040 |
|---|
| Symbol | |
|---|
| ID | 6409700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2211505 |
|---|
| End bp | 2211969 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642711926 |
|---|
| Product | glutathione-dependent formaldehyde-activating GFA |
|---|
| Protein accession | YP_001991038 |
|---|
| Protein GI | 192290433 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3791] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGGA CCGGCAAAGC GGTGCTCTCC GGCGGCTGCC AGTGCGGCGC GATCCGCTAC
GCGCTGTCGG CGCCGCCGCT GAGCACGGCG CTGTGCCATT GCCGGATGTG CCAGAAGGCG
ACCGGGGCAC CGTTCGCCTC TATGGCCGAG GTCGCCAAGG ACAACTTTGC CTGGACCCGC
GGCCAGCCTG CGTCGTTCCG CTCCTCCTCG GTCGCCGAGC GCGACTTCTG CAAGGATTGC
GGCACCCCGC TGGGCTATCG GCTGATGTTC TGCGACAGCA TCGAGATCCT GACCGGAACT
TTCGATCGGC CGGACCGGGT GGTCCCGACA ATGCAATACG GCACCGAAGC AAGGCTCGGC
TGGACCGGCA CGATCGCGAA CCTGCCGAGC AAGACCACGC TGCAGAACTA CGGGCCCGAC
AGGCTGGCAC AAGTGTTCAG CTATCAGCAG CCGGACCACG ATTAA
|
|---|
| Protein sequence | MTGTGKAVLS GGCQCGAIRY ALSAPPLSTA LCHCRMCQKA TGAPFASMAE VAKDNFAWTR
GQPASFRSSS VAERDFCKDC GTPLGYRLMF CDSIEILTGT FDRPDRVVPT MQYGTEARLG
WTGTIANLPS KTTLQNYGPD RLAQVFSYQQ PDHD
|
|---|
| |