Gene Rpal_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1973 
Symbol 
ID6409633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2134002 
End bp2134331 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content61% 
IMG OID642711859 
Productsmall multidrug resistance protein 
Protein accessionYP_001990971 
Protein GI192290366 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGGC TCTATCTTCT GATTGCGATC GTCGCTGAGG TCGTCGGTAC GTCGGCGCTG 
AAGGCGTCGC AGGGGTTTAC GGTGCTGCTG CCGTCGGTGC TTGTTGTCGT CGGCTACGGC
GCGGCGTTCT ATTTCCTGTC GCTGACGCTG AGCAGCATCT CGGTCGGCAT CGCCTATGCG
CTGTGGTCCG GGATCGGGAT CGTGCTGATC TCGGCGGTCG GCTGGCTATG GTTCGGCCAG
GCTTTGGACG CCGCGGCGAT GGTCGGCATC GCGTTCATCA TCGCCGGCGT CGGCATCATC
AATTTTTTCT CGAACGTGTC TGCGCATTAG
 
Protein sequence
MKWLYLLIAI VAEVVGTSAL KASQGFTVLL PSVLVVVGYG AAFYFLSLTL SSISVGIAYA 
LWSGIGIVLI SAVGWLWFGQ ALDAAAMVGI AFIIAGVGII NFFSNVSAH