| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1964 |
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| Symbol | |
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| ID | 6409624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2119622 |
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| End bp | 2121199 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711850 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001990962 |
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| Protein GI | 192290357 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.132088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGG CAGCCGAGCC GGCCACGCTG GCCGACGTCA TCCGTGCGCA GGCCAACACC
CGCGGCAACG AGATCGCCTA CGAGTTCGAG GGCCGCATCA GCACCTTTGC GGATTTCGAC
CGCCACACCA ACCAGGTCGC CCGCGCGCTG CAGGCCTCCG GCGTGCAACC GAACGAGCGC
ATCACCTATC TCGGCAAGAA CAGCGACATC TATTTCGAGC TGTGGTCCGG CGCGATCAAA
GCCAAGGCGG TGATGGCGCC GGTGAACTGG CGGCTCGCCG GACCGGAGAT CGCCTACATC
GTCGAGGACT GCAAGGCGGC GATCCTGTTC GTCGGACCGG AATTCGTCGA TCAGGTCCGC
GGCCTCAAGG ACCAGATCCC GAGCGTGCGC GCCATCATCA CCACAGAAGG CGGCGCGCCG
GAGTGGCAGG ACCTCACCAA ATGGCGCGAC GCGCAGTCGA GCGATGATCC GCAGGTCGCG
ATCGCGCCGT CCGACATCGC GATCCAGCTC TACACCTCCG GCACCACCGG CAAGCCGAAG
GGCGCGATGC TCAGCCACGC CAACTTCCTG TCCCTGGTCC GTGCCGGCCA GGACAACAAG
CCGGAGTGGA ACCGATGGTC GCCCGACGAC GTCTCGCTGG TGGCGATGCC GGTGTTCCAC
ATCGGCGGCT CCGGCTGGGG CATGATGGGA ATCTATCACG GCGCCAAGGG CGTGATCGCG
CGTGAATTCG ATCCGACCAA GGTGCTCGAT TTCTTCGAGC AGTCCGGCAT CACCAAGCTG
TTCATGGTGC CGGCCGCGAT GCAGTTCGTG GTACGGCAGC CGCGTGCTCG CGAGGTCGAT
TTCTCGCGGC TGAAATACAT GCTGTACGGC GCCTCGCCGA TCCCGGCGGC GCTGCTGAAA
GAATGCATCG ACGTCTTCAA GTGCGGCTTC GTGCAGATGT ACGGCATGAC CGAGACCACC
GGCACCATCG TGGCGTTGCC ACCGGAGGAC CACGTCGAAG GGCTCGAACG GATGCGCTCA
GCCGGCAAGG CGCTGCCCGG CGTCGAGATC GCGATCCTCG ATCCCGACGG CAAACCGCTG
CCGCCGCGGC AGGTCGGCGA GATCGCGACC CGCTCCGGCT CCAACATGGT CGGCTACTGG
AATCTCCCCG ACGCCACCAA GAAGACGATC GACGGCGACA ACTGGCTGCG CACCGGCGAC
GCCGGCTACA TGGACGAGGA CGGCTACGTC TACATCCATG ACCGCATCAA GGACATGATC
ATCTCCGGCG GCGAGAACAT CTATCCGGCC GAGGTCGAGA GCGCGATCTG CGATCACCCC
GACGTCGCCG AAGTTGCGGT GGTCGGCGTG CCCGACGATC AGTGGGGCGA GTCGGTGAAG
GCCGTGGTGG TGATGAAGCC CGGCAAGGAA GCGACCGCGC AGGACATCAT CGGCTTCACC
CGCACCCGCA TCGCCGGCTA CAAGACGCCG AAGTCGATCG ACTTCATCCC GGCCCTGCCC
CGCAACGCCT CCGGCAAAAT CCTCCGCCGC CAGCTCCGCG ATCCGTATTG GAGCGGCAAG
GACCGGCAGG TGAACTGA
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| Protein sequence | MSEAAEPATL ADVIRAQANT RGNEIAYEFE GRISTFADFD RHTNQVARAL QASGVQPNER
ITYLGKNSDI YFELWSGAIK AKAVMAPVNW RLAGPEIAYI VEDCKAAILF VGPEFVDQVR
GLKDQIPSVR AIITTEGGAP EWQDLTKWRD AQSSDDPQVA IAPSDIAIQL YTSGTTGKPK
GAMLSHANFL SLVRAGQDNK PEWNRWSPDD VSLVAMPVFH IGGSGWGMMG IYHGAKGVIA
REFDPTKVLD FFEQSGITKL FMVPAAMQFV VRQPRAREVD FSRLKYMLYG ASPIPAALLK
ECIDVFKCGF VQMYGMTETT GTIVALPPED HVEGLERMRS AGKALPGVEI AILDPDGKPL
PPRQVGEIAT RSGSNMVGYW NLPDATKKTI DGDNWLRTGD AGYMDEDGYV YIHDRIKDMI
ISGGENIYPA EVESAICDHP DVAEVAVVGV PDDQWGESVK AVVVMKPGKE ATAQDIIGFT
RTRIAGYKTP KSIDFIPALP RNASGKILRR QLRDPYWSGK DRQVN
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