| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1958 |
|---|
| Symbol | |
|---|
| ID | 6409618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2114376 |
|---|
| End bp | 2115176 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642711844 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_001990956 |
|---|
| Protein GI | 192290351 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCA AACACGTCAC GCTCGATTTC GACGGTCCCG TTGCGATCCT GAAGCTCGAT
CATCAGGAAG TCATGAACGC GGTGTCGATC GACATGCTCG GCGGACTCGG CGAAGCGCTC
GACGCGATCG AAGACAAGCG AGCCGAGGTG CGCTGTCTGG TGATCACCGG CGCTGGACGT
GCGTTCTGCA CCGGCGCGAA CCTGCAGGGC CGCAACTCCG GCAACAACAT GAGCCAGAGC
GGCAAGGGCG CGGGCGCCGC GCTCGAGACC GCGTTCCATC CGTTCCTGCG CCGGCTGCGC
AAGCTGCATT GCCCGATCGT CACCTCGGTC AACGGTCCGG CGGCCGGCGC TGGCATGAGC
TTCGCGTTGA TGGGCGACAT GATTCTGTGC GCCAAGTCGT CGTACTTCCT GCAGGCGTTC
CGCCGCATCG GTCTCGTGCC GGATTGCGGC TCGACCTGGC TGCTGCCGCG GCTCGTCGGC
AAGGCGCGAT CGGTCGAGCT GTCGCTGCTC GGCGAGAAGC TGCCGGCCGA CAAGGCGCTG
GAATGGGGCC TCGTCAATCG CGTGTACGAG GACGCCGAAC TGTGGGCCGA AACCATGAAG
CTGGCGCACG ACCTCGCCAA CGGACCGACC ATCGCTCTGT CGCTGATCCG CAAGCTGTAT
TGGGACTCGC CGGAGAATTC GTTCGAGGAG CAGCTCAACC TCGAATTCGA ATGCCAGCGT
GTCGCCGGCT CGACCGAGGA CTTCAAGGAA GGCGTCGGTG CGTTCCTCGA AAAGCGTCCG
GCGCAGTTCA AGGGCAAATA A
|
|---|
| Protein sequence | MQFKHVTLDF DGPVAILKLD HQEVMNAVSI DMLGGLGEAL DAIEDKRAEV RCLVITGAGR
AFCTGANLQG RNSGNNMSQS GKGAGAALET AFHPFLRRLR KLHCPIVTSV NGPAAGAGMS
FALMGDMILC AKSSYFLQAF RRIGLVPDCG STWLLPRLVG KARSVELSLL GEKLPADKAL
EWGLVNRVYE DAELWAETMK LAHDLANGPT IALSLIRKLY WDSPENSFEE QLNLEFECQR
VAGSTEDFKE GVGAFLEKRP AQFKGK
|
|---|
| |