| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1946 |
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| Symbol | |
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| ID | 6409606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2099535 |
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| End bp | 2100485 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711832 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001990944 |
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| Protein GI | 192290339 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGACT TCAAAGCGCT CGAAACATTC ATCTGGGTCG TGACGCTCGG CAGCTTCCGC
GGCGCGGCGC ACAAGCTGAA CACGACGCAG CCGGCGATCT CGCAGCGGAT CGCACAACTG
GAGCGGGAGC TCGGGGTGCG GCTGCTGCAG CGCGACCACC GAGTCGCCTC GCCGACGCCG
AGCGGTCGGC AGTTGATGCT GTATGCCGAG AAGCTGATCC GGCTGCGGAC CGAGATGATG
GCGGCGGTGA GCGATCAGTC GAGCATGCGG GGCGTGCTGC GGCTGGGCGT CGCCGAGACC
ATCGTCCACA CTTGGCTGCC ACGGCTGATC GAGCAGGTGA ACCGGGTCTA TCCCAACTTG
TCGCTGGAGA TCGAAGTCGA CATCACCCCG AACCTGCGCG CGCGGCTGTT GGCGCAGGAG
ATCGAGCTGG CGTTCCTGCT CGGCCCGATG ACGGCGTCCA CCGTGCGCAG CCGGGTGCTG
TGCGAGTATC CGATCGGCTT CCTCGCCAGC CCCTCGCTCG GCCTCGGCAA CGGTCCGCTG
ACGGTGGCGG ATCTGGCGAA ATTCCCGATC ATCACCTTCC CGCGCAAGAC GCAGCCTTAT
GAGATCGTTC GCTCGCTGTT CAACAAGCCG GAGCTCCCGC CGATCCGCCT GCATGCCTCC
GCATCACTCG GCACGGTGAT CCACATGGCG ATCGAGGGCC TCGGCATCGC GGTGATCCCG
ACCGCGATCG TCGAGAACGA ACTTGCCGAA GGCCGGCTGC AACTTCTGCA GACCGACCTG
AAGATCTCAC CGCTGCGGTT CTCCGCAAGC TGGCTCGCCT CCCCCGACAC GGTGGCGATC
GAGCGCGTCG CCGAACTCGC GGCCGAGATC GCGCACACCG GCGGCTTCAT GCCCGATCCT
GCAATGCAGC TCCGCGATAT TGCTCACGTC GTTGAACCGG CGATTGGTTG A
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| Protein sequence | MVDFKALETF IWVVTLGSFR GAAHKLNTTQ PAISQRIAQL ERELGVRLLQ RDHRVASPTP
SGRQLMLYAE KLIRLRTEMM AAVSDQSSMR GVLRLGVAET IVHTWLPRLI EQVNRVYPNL
SLEIEVDITP NLRARLLAQE IELAFLLGPM TASTVRSRVL CEYPIGFLAS PSLGLGNGPL
TVADLAKFPI ITFPRKTQPY EIVRSLFNKP ELPPIRLHAS ASLGTVIHMA IEGLGIAVIP
TAIVENELAE GRLQLLQTDL KISPLRFSAS WLASPDTVAI ERVAELAAEI AHTGGFMPDP
AMQLRDIAHV VEPAIG
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