| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1939 |
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| Symbol | |
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| ID | 6409599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2091719 |
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| End bp | 2092642 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711825 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001990937 |
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| Protein GI | 192290332 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.491739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGTTCT TCACGTCACG ATTGTTCTGG ATCGCCCTGC TGGTGGTCGC TGTCGCGGCG
ACGCTGCCGC TCTACGTCTC CGGCTACATC CTCGGGCTGC TGACGGTGGC TTTCTACTTC
GGCGTTTTCG CGATGTCCTG GGATCTGCTG TTCGGCTTTG CCGGCGAGGT GAATTTCGGC
CCGACCTTCC TGATCGGCAC CGGCGCCTAC ACCGCAGGCA TCGTCAACAA TCTCTACGGC
GTGTCGCCGT ACTTCTGCAT TTTCATCGGC GCGATGGCCG CGGTGGTCGC GGGCTTCGTC
CTGGCGCTTC CGGCGCTGCG GGTGCGCGGG CCGTATTTCG GCCTGACCAC GCTGGTCGCA
GTGCTGATGC TGCAGAACTT CATCGTCGTG TTCGCCGACC TCACCGGCGG CGAGATCGGG
TTGACCATTC CGGACGTCAT TACCATCAAC GCCGGTGCCA ATTACTGGAT CGCGCTCGGC
TTCATGACGG TGAGCGGCGC GATACTGTAC GGGCTATCGC AGTCGCCGAT CGGCCTGGTG
CTGCAGGCCT CGGGCCAGGA TCCGGTGCAG GCCGGCGCGC TCGGCTTCAA CATCGTCAAG
CACAAGCTGT TCGCCTTCGT GGTTAGCGCC TTCTTCTCCG GCCTATCGGG CGCGCTTTTG
GTGTTCTACT TCGGCACCGC CTCGGTCGGC ACCGTGGTCG ATGTCGCGGT CGGCGTGAAC
GTGATCGTGG CAGCCGTGCT CGGCGGGCGG CGAACCGTGA TCGGCGCGGC GCTGGGCGCG
GTGTTCCTGA TCGTCGCCGG CGAATTCCTG CGCCCGACCG GCGAACTCGC CACCTTCATC
GTCTCGGCGA TCGCTCTGCT CGTCGTGCTG TTCTTCCCCG GCGGCTTCCT CGGAGCCGCC
ATGTCGCGTG AGGCCCGGAC TTGA
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| Protein sequence | MGFFTSRLFW IALLVVAVAA TLPLYVSGYI LGLLTVAFYF GVFAMSWDLL FGFAGEVNFG
PTFLIGTGAY TAGIVNNLYG VSPYFCIFIG AMAAVVAGFV LALPALRVRG PYFGLTTLVA
VLMLQNFIVV FADLTGGEIG LTIPDVITIN AGANYWIALG FMTVSGAILY GLSQSPIGLV
LQASGQDPVQ AGALGFNIVK HKLFAFVVSA FFSGLSGALL VFYFGTASVG TVVDVAVGVN
VIVAAVLGGR RTVIGAALGA VFLIVAGEFL RPTGELATFI VSAIALLVVL FFPGGFLGAA
MSREART
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