| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1892 |
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| Symbol | |
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| ID | 6409552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2039796 |
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| End bp | 2040656 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711781 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001990893 |
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| Protein GI | 192290288 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCG CAACGCGGCG AAAAGACACT GCTGAATTGC GCGCATACCA CAGGCAGGAA
GGCCCCGTAG CAGCCGCAAA TTGTGCAGGA CACCTTCAGA CCATTGCGCG ACCGGTCGCC
GCGATGACGG CCACCTATCC GAACGAGAGC ACCAGCACGC GTCACTTGCA TCGGCGCGAC
CAGTTCATCC TGCAGATCAC GGGTGTAACC GCCATGATGA CCGAACGCGG TCATTTCGTG
GTGCCGCCCG GTCATGGCTT GTGGATTCCT GCCGGCGTCG TGCATCAATC GCGTGCCTGG
GGTGAGGTCG AGGCGCAGAC GATCTACGTC ACGCCGAATC GCGAGCGGAA GGCCTCCGAT
ACGTGCCGCC TGATCCGCGC CTCGTCGCTG ATCGAAGCGC TGATGGACGA GGCCGTCCGC
ATACCTGAGA TCTACGACCA GAATGGACGC GACGGCACGC TCATCGAACT TCTCCTCACC
GAGATCGCGC GGATGCCGGA GGTGACGCTG CACGTGCAGA TGCCGCCGGA CCCGCGCCTT
GCCGAGATCT GCAAGGCGGT GCTGGGCGAT CCGTCGTCGA ACCTCACTCT TGACCACTGG
GCCGACAAAT GCGGCCTCAG CCGCCGGACG CTAACCCGGC TATTCCGCCG AGAGACTGGC
CAGAGCTTTT CAGGCTGGCG GCAGCGCGTG CGACTTTTGG AAGCCTTGGC ACGTCTCGGA
GCAGGCGAAA CTGTGACTGG CGTCGCGCTC GACGTCGGCT ACGATAGTCC AAGTGCCTTC
GCCGCGATGT TCAAGCGCGA GCTTGGCTCA GCACCGCGGC ACTATCTTCG TTGGACGGAT
CAGGAGGTGG CGCTGCGCTA A
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| Protein sequence | MKVATRRKDT AELRAYHRQE GPVAAANCAG HLQTIARPVA AMTATYPNES TSTRHLHRRD
QFILQITGVT AMMTERGHFV VPPGHGLWIP AGVVHQSRAW GEVEAQTIYV TPNRERKASD
TCRLIRASSL IEALMDEAVR IPEIYDQNGR DGTLIELLLT EIARMPEVTL HVQMPPDPRL
AEICKAVLGD PSSNLTLDHW ADKCGLSRRT LTRLFRRETG QSFSGWRQRV RLLEALARLG
AGETVTGVAL DVGYDSPSAF AAMFKRELGS APRHYLRWTD QEVALR
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