| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1815 |
|---|
| Symbol | |
|---|
| ID | 6409473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 1949016 |
|---|
| End bp | 1949843 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642711702 |
|---|
| Product | inositol monophosphatase |
|---|
| Protein accession | YP_001990816 |
|---|
| Protein GI | 192290211 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
|---|
| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCG CGTTCGAACA GCCCGCCGTC GTTTCGGCCG AGCACGCCGC CGCTTTGCTC
GAACCGCTCA CCAAGCTGGT GCTGCGCGCC GGGGCGGCGA TCATGGCGAT CCCGCGCGAC
GCCAAGGTCA CTCAGAAGCC GGACGGCTCG CCGGTGACGC CCGCCGATCT CGCCGCTGAC
CAGGTGATCG CCGAGGGGCT GGCGCAGATC GCTCCGCACG TCCCGGTGCT GTCCGAAGAA
TGTTGCGGCA ATGGACGACC GACGTCGGGC AGCTTCTTCG TGGTCGATCC GCTCGACGGC
ACCAAGGAGT ACATCGCCGG CCGCAACGAA TTCACCGTCA ACCTGGCGCT GGTGTGCGAC
GGGGTGCCGG TGCTCGGCAT CATCGGCGCG CCGGCTCGAG GGCTGGCGTG GCGCGGCGTG
GTCGGCCATG GCGCTGAGCA ACTGACTGTC GCCGCGGACG GGGTCAGCTT TGCAGCCACC
GCCATCCGGA CCAGGCCGCT GCCGCAGCCG GGCGAGCCGT GGACCGCAAC GGTCAGCCGG
TCGCATCTCG ATCCCGCCAC CGTCGCCTTC ATCGACGCCC GCCCCAGCGC CGTGCGCACG
ACGCTGGGTT CGTCGCTGAA ATTCTGCTGG ATCGCCGAAG GCAAGGCCGA CATCTACCCG
CGGCTGGCGC CGATCTGCGA GTGGGATATC GCGGCGGGCG CTGCGCTGGT CATCGCCGCG
GGCGGCAAGG TGACCGACGC GACCGGCGCG CCGTTGCGGT TCGACGCACC GCGGCCGAAC
TTCATCGTGC CCGAATTCAT CGCCTGGGGC GACCCTGACG GTCGCTAG
|
|---|
| Protein sequence | MTAAFEQPAV VSAEHAAALL EPLTKLVLRA GAAIMAIPRD AKVTQKPDGS PVTPADLAAD
QVIAEGLAQI APHVPVLSEE CCGNGRPTSG SFFVVDPLDG TKEYIAGRNE FTVNLALVCD
GVPVLGIIGA PARGLAWRGV VGHGAEQLTV AADGVSFAAT AIRTRPLPQP GEPWTATVSR
SHLDPATVAF IDARPSAVRT TLGSSLKFCW IAEGKADIYP RLAPICEWDI AAGAALVIAA
GGKVTDATGA PLRFDAPRPN FIVPEFIAWG DPDGR
|
|---|
| |