| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1804 |
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| Symbol | |
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| ID | 6409461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1938764 |
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| End bp | 1939936 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711691 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001990806 |
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| Protein GI | 192290201 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.392184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCCA ACGCGCAGAG CCTGTTCAAC TTCGATCTCG GCGAGACCGC CGACGCGATC
CGGGAGACCG TTCGCGACTT CGCCGCCAAC GAGATCGCGC CGCGCGCCGA GGCCATCGAC
AAGACAAATA CGTTCCCGCG CGATCTGTGG CCGAAGCTCG GCGCGCTTGG CCTGCACGGC
ATCACCGTCG AGGAGGATTA CGGCGGCGCC GGGCTCGGTT ATCTCGAGCA CTGCATCGCG
ATGGAGGAGA TCTCCCGCGC CTCGGCATCG GTCGGCCTGT CCTACGGCGC GCACTCCAAC
CTCTGCATCA ATCAGATCCG CCGCAACGGC AACGAAGCGC AGAAGCAGAA GTATCTGCCG
AAGCTGATCT CCGGCGAGCA TGTCGGCGCG CTTGCGATGA GCGAGCCGGG TGCCGGCTCC
GACGTGGTGT CGATGAAGAC CCGCGCTGAG AAGAAGGGCG ACCGCTTCGT CCTCAACGGC
AACAAGATGT GGATCACCAA CGGCCCGATC GCCGAGACGC TGGTGGTGTA TGCCAAGACC
GATCCGAACG CCGGGCCGCG CGGCATCACC GCGTTCCTGA TCGAGAAGGG CTTCAAGGGG
TTCTCGACCG CGCAGAAGCT CGACAAGCTC GGCATGCGCG GCTCCGACAC CGGCGAATTG
GTGTTTGAGG ATTGCGAAGT GCCGGAGGAG AACGTGCTCG GCGAGGTCGG CCGCGGCGTC
AACGTGCTGA TGAGCGGGCT CGACTACGAG CGCGCGGTGC TGGCCGCCGG CCCGGTCGGC
ATCATGCAGG CCTGCATGGA CGTGGTGCTG CCCTACGTGC ACGAGCGCAA GCAGTTCGGC
GAACCGATCG GCACCTTCCA ATTGGTGCAG GGCAAGGTCG CCGACATGTA TGTGACGATG
AACGCCTCGC GCGCTTACGT CTATGCGGTG GCGAAGGCCT GCGACCGCGG CGAGACCACC
CGCGAGGACG CCGCCGGTGC GATCCTGTAC GCTGCCGAAC GCGCCACCCA ATGCGCGCTG
GACGCGATCC AGCTGCTCGG CGGCAACGGC TACATCAATG ACTACCCGAC CGGCCGCCTG
CTGCGCGACG CCAAGCTCTA CGAGATCGGC GCCGGCACCA GCGAGATCCG CCGCATGCTG
ATCGGACGCG AGCTGTTCAC CAAGACGGCG TGA
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| Protein sequence | MMSNAQSLFN FDLGETADAI RETVRDFAAN EIAPRAEAID KTNTFPRDLW PKLGALGLHG
ITVEEDYGGA GLGYLEHCIA MEEISRASAS VGLSYGAHSN LCINQIRRNG NEAQKQKYLP
KLISGEHVGA LAMSEPGAGS DVVSMKTRAE KKGDRFVLNG NKMWITNGPI AETLVVYAKT
DPNAGPRGIT AFLIEKGFKG FSTAQKLDKL GMRGSDTGEL VFEDCEVPEE NVLGEVGRGV
NVLMSGLDYE RAVLAAGPVG IMQACMDVVL PYVHERKQFG EPIGTFQLVQ GKVADMYVTM
NASRAYVYAV AKACDRGETT REDAAGAILY AAERATQCAL DAIQLLGGNG YINDYPTGRL
LRDAKLYEIG AGTSEIRRML IGRELFTKTA
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