| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1802 |
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| Symbol | |
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| ID | 6409459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1935944 |
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| End bp | 1937116 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711689 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001990804 |
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| Protein GI | 192290199 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.586412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACC ATGCCGCGGA GCAGGACGAA TACCACGACA TCCGCGACGC CGTCGCCAAA
CTGTGTGCGC AGTTTCCCGG CGAGTACTGG CGCAAACTCG ACCGCGAAAT GGCCTATCCC
AAGGCGTTCG TCGACGCCCT GACGGAGGCC GGTTACCTTT CCGTTCTGAT CCCCGAGGAA
TACGGCGGCG CCGGCCTGAA GCTGTCGGCC GCGGCGGCGA TCCTGGAAGA GATCCAGCGC
GCCGGCTGCA ACGGCGGCGG CTGCCACGCC CAGATGTACA CCATGGGCAC CCTGCTGCGG
CACGGCAGCG ACGAGCAGAA GGCCAAGTGG CTGCCGAAGA TCGCCAGCGG TGAACTCCGC
CTGCAGGCGT TCGGCGTCAC CGAGCCGACC TCGGGCACCG ACACCACCTC GCTGAAGACC
TTCGCCAAGA AGGACGCGAA CGGCGACTAC GTCGTCAACG GCCAGAAGAT CTGGACCAGC
CGGGCGGAAT ATTCCGACCT GATGATCCTG CTCGCACGCA CCACGCCGAA GGATCAGGTG
ACCAAGAAGA CCGAAGGCCT CTCGGTGTTC CTGGTCGACA TGCGGGAAGC GCGCGGCCAT
GGCCTCGAGA TCCGGCCGAT CCGCACCATG ATGAACCACG CCACCACCGA AGTGTTCTTC
ACCGACATGA AGGTGCCGAA GGAGAACCTG ATCGGCGAAG AGGGCAAGGG CTTCCGCTAC
ATCCTCTCCG GCATGAATGC CGAGCGCATC CTGATCGCCT CGGAGTGCGT CGGCGACGCC
AAATGGTTCA TCGCCAAGGC CAGCGCCTAC GCCAAGGACC GCGCGGTGTT CGGCCGGCCG
ATCGGCCAGA ACCAGGGCAT CCAGTTCCCG ATCGCCAAGG CCTACGCCAA CATGCGCGCC
GCCGAGCTGA TGGTGAAGGA AGCCACCCGC AAGTACGAAG CCGGCATGGA TTGCGGCGCC
GAGGCCAACA TGGCCAAGAT GCTCGCGGCC GATGCGTCGT TCGAGGCGGC CAATGCCTGC
ATCCAGACCC ACGGCGGCTT CGGCTTCGCC GAGGAATACG ACGTCGAGCG CAAATTCCGA
GAAACCCGGC TGTATCAGGT CGCACCGATC TCGACCAACC TGATCCTGTC GCATCTCGCC
GAGCACGTGC TCGGGATGCC GCGGTCGTAC TAA
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| Protein sequence | MKHHAAEQDE YHDIRDAVAK LCAQFPGEYW RKLDREMAYP KAFVDALTEA GYLSVLIPEE
YGGAGLKLSA AAAILEEIQR AGCNGGGCHA QMYTMGTLLR HGSDEQKAKW LPKIASGELR
LQAFGVTEPT SGTDTTSLKT FAKKDANGDY VVNGQKIWTS RAEYSDLMIL LARTTPKDQV
TKKTEGLSVF LVDMREARGH GLEIRPIRTM MNHATTEVFF TDMKVPKENL IGEEGKGFRY
ILSGMNAERI LIASECVGDA KWFIAKASAY AKDRAVFGRP IGQNQGIQFP IAKAYANMRA
AELMVKEATR KYEAGMDCGA EANMAKMLAA DASFEAANAC IQTHGGFGFA EEYDVERKFR
ETRLYQVAPI STNLILSHLA EHVLGMPRSY
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