Gene Rpal_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1763 
Symbol 
ID6409420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1894736 
End bp1895233 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID642711651 
Productprotein of unknown function DUF477 
Protein accessionYP_001990766 
Protein GI192290161 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.479141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATCC GGCGGATCGG CAAGCACCTG TTCACCAGCC GCGGCGCGGT GCACCGCGCG 
TTTTCGCCGG ATGCGTTCGA TGCGATCGAG CGTGCCATCA AGGCGAGCGA AACCCGCCAC 
GTGGGCCAGA TCCGCTTTGT CGTCGAAGGC GCGCTCGACG GCGCGCCGCT GTTTCGCGAT 
CAGCCGGTGC GCGAGCGCGC GCTCGACATC TTCTCGCAGC TTCGGATCTG GGACACCGAG 
CACAACAACG GCGTGCTGAT CTATCTGCTG CTGGCCGACC GCAACGTCGA GATTATCGCC 
GATCGCGGCA TCGACGGCCG CGTCGGCGCC GACACCTGGG AGGCGATCTG CCGCGAAATG 
GAGGCCGAGT TTCGCGAGGG CCGGTTCGAG CAGGGCGTGC TCCGCGGCAT CGACCGCATC 
ACCGCGCATC TCGCCGAACA TTTCCCGCGC AGCGGCCCGA GCCCCAACGA AATCCCCGAC 
GCACCTGTAG TCGTGTAG
 
Protein sequence
MGIRRIGKHL FTSRGAVHRA FSPDAFDAIE RAIKASETRH VGQIRFVVEG ALDGAPLFRD 
QPVRERALDI FSQLRIWDTE HNNGVLIYLL LADRNVEIIA DRGIDGRVGA DTWEAICREM 
EAEFREGRFE QGVLRGIDRI TAHLAEHFPR SGPSPNEIPD APVVV