Gene Rpal_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1748 
Symbol 
ID6409405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1876697 
End bp1877119 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content63% 
IMG OID642711636 
ProductRibulose-bisphosphate carboxylase 
Protein accessionYP_001990751 
Protein GI192290146 
COG category[C] Energy production and conversion 
COG ID[COG4451] Ribulose bisphosphate carboxylase small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTGA CCCAAGGCTG TTTCTCGTTC CTGCCGGATC TCACCGACGA ACAGATCGCC 
GCTCAGGTGC AATACGCGCT GTCCAAGGGC TGGGCGGTGA ACCTCGAATT CACCGACGAT
CCGCATCCCC GCAACACCTA TTGGGACATG TGGGGCCTGC CGATGTTCGA TCTGCAGGAC
GCCGCCGGCG TGATGATGGA ACTGAACGAA TGCCGCAAGA TCTACGGCGA CCGCTACATC
CGGCTGTCGG CGTTCGACTC CTCGCACGGT TGGGAGTCGG TGCGGCTGTC GTTCATCGTC
AACCGCCCGA AGGACGAGCC CGGCTTCCGG CTCGACCGTC AGGAGTCCGA CGGCCGCAAC
ATGCGGTACA CCACACGCGC CTATTCGGCC GACAAGCCTG AAGGCCGCCG CTACGGAGGC
TGA
 
Protein sequence
MRLTQGCFSF LPDLTDEQIA AQVQYALSKG WAVNLEFTDD PHPRNTYWDM WGLPMFDLQD 
AAGVMMELNE CRKIYGDRYI RLSAFDSSHG WESVRLSFIV NRPKDEPGFR LDRQESDGRN
MRYTTRAYSA DKPEGRRYGG