| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1694 |
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| Symbol | bchD |
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| ID | 6409351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1816707 |
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| End bp | 1818479 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642711582 |
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| Product | magnesium chelatase subunit D |
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| Protein accession | YP_001990697 |
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| Protein GI | 192290092 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1240] Mg-chelatase subunit ChlD |
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| TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0775219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCG CGCTCGCATG GTCCGATGCG GTGACCGCGG CGCAGTTGTT CGCGGTCGAT
CCGGTCGGTA CCGGCGGTGT GTTGTTGCGC TCACGCGCCG GCCCGGTGCG CGATCGCTGG
CTCGCAATGA TGCGGGCTGC GCTGCCGCCT GAACAACCCT ATAAGCATCT TCCGCTGCAT
ATCGCCGACG GCCGCCTGCT CGGTGGACTG GATCTGTCTG CGACGCTGCT CGCCGGCCGG
CCGGTCGCCG AGCGCGGCCT GCTGTCGGAA GCCGACGGCG GCGTGCTGGT GGTGGCGATG
GCCGAGCGGC TGCAGTCCTC GACCAACGTG TATCTGACCG CAGCTATGGA CGCGCACGAA
ACCGCGGTGG AGCGCGACGG CCTGTCGCTG CGGATGCCGG CGCGGTTCGG TGTGGTCGCG
CTCGACGAAG GCCTCGAGGA CGAGTTCTCG CCGGCCGGTC TGCGCGACCG GCTCGGCTTC
CATCTCGATC TCGATCAGTT CGCCTGGCGC GAGACCGACG ACTTCCCGAT CTCGCTCGAC
GACATCCGCG CCGCTCGCGC GCGGCTCGCC GATATCAAGG TCGAGAGTGA GCAGATCGAG
GCCGTGTGCA CGGCGGCCGC AGCGCTCGGC ATCATCTCGC TGCGAGCGCC GCTGCTGGCG
ATCCGCGCCG CCAAGGCGAG CGCTGCTCTG TTCGATCGCA CCAAGATCGA ACAGGACGAC
ATCACGCTCG CCGCGCGCCT GGTGCTGGCG CCGCGTGCGA CGATCTTCCC GCAGCAGGAA
CAGCCGGATC AGGCCGACGA GCCGCCGCCG CCCGAGCCCC CGCCGCCGGA AGACGACAAT
CAGGACAACA ACGATCAGGA ACAGCAGACG CCTGATATCG ACAAGGCGCT CGACGAGGTG
ATCCTCGCGG CCGTCAAGGC TGCGATGCCG CCCGGCGTGC TGGAGGCGAT GCGCGCCTCG
GCCGGACGGG CGCGTGCCCG CTCGGCCGGC AAGGCCGGCG AACTTCAGAA GTCGAAGAAG
CGTGGCCGCC CCGCCGGCAG CATCCGCGGC GAACTGCGCG ACGGCTCCAA GCTCAACGTG
ATCGAGACGC TGCGGGCCGC AGCGCCGTGG CAGCCGCTGC GGCGGCGCCA GGCCGAGGGA
CGCAACGGCA GCGCGCCGCG CATCCTGGTC GAGAAGGACG ATTTCCGGAT CGCGCGCTTC
AAACAGCGCA CCGAGACCAT CACCATCTTC GTGGTCGATG CGTCGGGGTC GGCGGCTTTG
CACCGGCTCG CCGAAGCCAA GGGCGCGGTC GAGTTGTTAC TTGCGGATTG CTACGTCCGC
CGCGATCAGG TGGCGATGAT CTCGTTCCGC GGCACCATCG CCGAGATCCT TCTGCCGCCG
ACGCGGTCGC TCGCGCGCGC CAAGCGCAGC CTCGCCGGCC TGCCGGGCGG CGGCGGCACG
CCGCTGTCAG CCGGGCTCGA CTGCGCGTTC ATGCTGGCGG ATTCGATCAA GCGCAAAGGC
CAGACGCCGA CGGTGATCGT GCTCACCGAC GGCCGTGCCA ACATCGCGCG CGATGGCGCA
CCGGGCCGGC CGCAGGCCGA GGAAGACGCC AAGTCGTCGG CGCGGCAGTT CCGCGTCGCC
GGAATCAGCT CTGTGGTGAT CGACATGTCG CCGCGTCCGG GGCCGCAGGC GGAAGCCTTC
GCCAAGGAAA TGGACGCGCG CTATCTGCCG ATGCCGCATG CCGACGCTAC CGTACTGGCG
CAGGCGGTGA CGGCCGCGAC CCGGCAGGAC TGA
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| Protein sequence | MSIALAWSDA VTAAQLFAVD PVGTGGVLLR SRAGPVRDRW LAMMRAALPP EQPYKHLPLH
IADGRLLGGL DLSATLLAGR PVAERGLLSE ADGGVLVVAM AERLQSSTNV YLTAAMDAHE
TAVERDGLSL RMPARFGVVA LDEGLEDEFS PAGLRDRLGF HLDLDQFAWR ETDDFPISLD
DIRAARARLA DIKVESEQIE AVCTAAAALG IISLRAPLLA IRAAKASAAL FDRTKIEQDD
ITLAARLVLA PRATIFPQQE QPDQADEPPP PEPPPPEDDN QDNNDQEQQT PDIDKALDEV
ILAAVKAAMP PGVLEAMRAS AGRARARSAG KAGELQKSKK RGRPAGSIRG ELRDGSKLNV
IETLRAAAPW QPLRRRQAEG RNGSAPRILV EKDDFRIARF KQRTETITIF VVDASGSAAL
HRLAEAKGAV ELLLADCYVR RDQVAMISFR GTIAEILLPP TRSLARAKRS LAGLPGGGGT
PLSAGLDCAF MLADSIKRKG QTPTVIVLTD GRANIARDGA PGRPQAEEDA KSSARQFRVA
GISSVVIDMS PRPGPQAEAF AKEMDARYLP MPHADATVLA QAVTAATRQD
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