Gene Rpal_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1687 
Symbol 
ID6409344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1809192 
End bp1809641 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content61% 
IMG OID642711575 
Producthypothetical protein 
Protein accessionYP_001990690 
Protein GI192290085 
COG category 
COG ID 
TIGRFAM ID[TIGR02284] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACACCG ATATTATCGA CCATCTGAAG ACGCTGCACA CCAGCGAGAT CGACGCCCGC 
AACGGCTACG AGGAAGCGCT GGAAGACGCG GAAGGCAAAG GCCTGACCTC GCTGTTCCGG
GATATGATCG CGCTACATCA CGGCAACGCC GAAGAACTCG CTGGCATGCT GATCAACGCC
GGCGAAACCG CCGACGATTC CGGCTCGTTT ATGAGCGTGG TTCACCGCAC CATCATGAGC
GTGCGCTCTC TGTTCGACGG CCTCGACGGC AGCGTGCTGC CGGGCCTGAT TGATGGCGAG
AAGCGCAATC TGTCAAAATA CGACGACGCG CTGAAGGCGA TTGCCGGCAT TCCGTCGATA
TCGTCGACGC TGTCGGCGCA GCGCGCCAAG ATCAGCGAAA AGATCGCGCT GATGGAGCAG
CAGAAGGCGG CCTACGAGGC GGCGACCTAA
 
Protein sequence
MDTDIIDHLK TLHTSEIDAR NGYEEALEDA EGKGLTSLFR DMIALHHGNA EELAGMLINA 
GETADDSGSF MSVVHRTIMS VRSLFDGLDG SVLPGLIDGE KRNLSKYDDA LKAIAGIPSI
SSTLSAQRAK ISEKIALMEQ QKAAYEAAT