Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1687 |
Symbol | |
ID | 6409344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1809192 |
End bp | 1809641 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642711575 |
Product | hypothetical protein |
Protein accession | YP_001990690 |
Protein GI | 192290085 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02284] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACACCG ATATTATCGA CCATCTGAAG ACGCTGCACA CCAGCGAGAT CGACGCCCGC AACGGCTACG AGGAAGCGCT GGAAGACGCG GAAGGCAAAG GCCTGACCTC GCTGTTCCGG GATATGATCG CGCTACATCA CGGCAACGCC GAAGAACTCG CTGGCATGCT GATCAACGCC GGCGAAACCG CCGACGATTC CGGCTCGTTT ATGAGCGTGG TTCACCGCAC CATCATGAGC GTGCGCTCTC TGTTCGACGG CCTCGACGGC AGCGTGCTGC CGGGCCTGAT TGATGGCGAG AAGCGCAATC TGTCAAAATA CGACGACGCG CTGAAGGCGA TTGCCGGCAT TCCGTCGATA TCGTCGACGC TGTCGGCGCA GCGCGCCAAG ATCAGCGAAA AGATCGCGCT GATGGAGCAG CAGAAGGCGG CCTACGAGGC GGCGACCTAA
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Protein sequence | MDTDIIDHLK TLHTSEIDAR NGYEEALEDA EGKGLTSLFR DMIALHHGNA EELAGMLINA GETADDSGSF MSVVHRTIMS VRSLFDGLDG SVLPGLIDGE KRNLSKYDDA LKAIAGIPSI SSTLSAQRAK ISEKIALMEQ QKAAYEAAT
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