Gene Rpal_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1631 
Symbol 
ID6409288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1745241 
End bp1746290 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content65% 
IMG OID642711520 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001990635 
Protein GI192290030 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCCAGC CAGCGACGCC CCCTCCCACA GATGTCATCG CGGTGCGCGA TCTGCGCATC 
CTGTTTCCGA CCCGTGACGG CCACGACACC GTCAAGGCGG TCGACGGCAT GGACTTCGAG 
GTTCGCACCG GCGAGACCTT CGGCATCATC GGTGAATCCG GATCGGGCAA GACCACGCTG 
GGGCGCGCCT TGGTGTCGCT GCTGAAGCCG ACCGAAGGGC AGATCCTGCA TCAGGGCGTC 
GATCCCGCTG CGCTCGGCGC CAAGGCGTTC CGCAAGCATC GCCGCGACTA CCAGATCGTG 
TTTCAGGACC CCAACGCGGC GCTCAACCCC CGGATGACCA TCATCGACAG CGTGATGGAG 
CCGTTGGAGA TCGTCGGCGA GGGGGATGCG GCCTCACGCC GTCGCCGCGG TATCGCGGCG 
CTCGAGCGTG TTGGTCTGTC TCCGGAAGCT GCCGATCGCT ATCCGCATCA GCTCTCGGGC 
GGACAGAAGC AGCGCGTCAA CATCGCGCGG GTCCTGACGC TGCGTCCCAA GGTGATCGTC 
TGCGATGAGG TGGTGGCGGC GCTGGACGTG TCGATCCGCG GCGACGTGCT CAACCTGTTC 
GCCGATCTGC AGCGCGAGTT CGGCCTCACT TACGTGTTCA TAACCCACGA CATCTCGGTG 
GTGTCGCACA TCTCGGACCG GATCGCCGTT ACCTATCTGG GCAAGCTGAT GGAGCTTGGT 
CCCGCCGAAG ACGTGATCGA GCATCCGCTG CATCCCTATA CGCGCGTGCT GCTGTCGGCT 
GAGCCGATTC CACTGCCGTC GCATCTGCGG GTCGATCGCC GCATCATTCT CGAAGGCGAG 
ATCCCGAGCC CGGTGGCGCC GCCGTCCGGC TGCCGGTTTC GCACCCGTTG TCCATCGGTG 
CGGCCGCGCT GCGCGGATGA GGTGCCAGCA TGGCGCGAAG TCAGGCCGGG GCATCGGGTC 
GCCTGCCATT TCGCGACCGC CGACGGTCCG CCACCCGATC AACGACAAGC ACAAAACACA 
ACAATCATGG GAGAACCAAC ATGCGCGTGA
 
Protein sequence
MTQPATPPPT DVIAVRDLRI LFPTRDGHDT VKAVDGMDFE VRTGETFGII GESGSGKTTL 
GRALVSLLKP TEGQILHQGV DPAALGAKAF RKHRRDYQIV FQDPNAALNP RMTIIDSVME 
PLEIVGEGDA ASRRRRGIAA LERVGLSPEA ADRYPHQLSG GQKQRVNIAR VLTLRPKVIV 
CDEVVAALDV SIRGDVLNLF ADLQREFGLT YVFITHDISV VSHISDRIAV TYLGKLMELG 
PAEDVIEHPL HPYTRVLLSA EPIPLPSHLR VDRRIILEGE IPSPVAPPSG CRFRTRCPSV 
RPRCADEVPA WREVRPGHRV ACHFATADGP PPDQRQAQNT TIMGEPTCA