| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1614 |
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| Symbol | |
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| ID | 6409271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1729094 |
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| End bp | 1729879 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642711503 |
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| Product | NLPA lipoprotein |
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| Protein accession | YP_001990618 |
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| Protein GI | 192290013 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.141443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGTA AACTCGTTTT CGCTGCGGCC GCCTTCGCCG CGCTCACCGC AGCGGCTCCG
GCCTTCAGCA CCGAAGTGGT CCGGATCGGC ACCACCGCCG GTCCCTACGC CGAGATTCTG
CGCTACGCCG GCGATCTCGC CGCCAAGCAG GGCATCGAGG TGAAGATCAC CGAATTCACC
GACTACACCG TGCCCAATGC GGCGTTGGCG CAGGACGATC TCGACATCAA CAACTTCCAG
CACCAGCCCT ATCTCGACAA CCAGGTGGCG CAGCGCGGCT ATGACATCGT CTCGATCGCC
AAGAGCATCA TCGTGCCGAT TGGGATCTAT TCGAACAAGG TCAAGACGCT GACCGACATC
AAGGACGGCG CCAGCGCCGC GATCCCGAAC GATCCGTCCA ACGGCGCCCG TGCGCTGCAA
CTTTTCGAGA AGGCAGGGTT GATCAAGCTG AAGCCGGGGA TCGGCATCAA GGCGACGATC
GCCGACATCG CCGAGAATCC CAAGCATCTC AAGATCGTCG AGCTTGACGC CGCGCAGCTG
CCGCGCTCGC TGAACGATCT CGATTTTTCG GCGGTCAATC TCAACTACGC GCTGAGCGCC
GGGCTCGATC CGAAGAGTGC GCTGCTGCTC GAAGGCGCCG ACACGAACTG GAACCTGGTG
TTCGCAGTGC GCGCCAAGAA CAAGGACAAC GCCACGCTGA AGAAGTTCGT CGAGATCTAT
CGCTCGCCGG AGGTGAAGGC CTTCACCGAG AAGCGCTTCA ACGGTACCAT TCTCACCACC
TGGTGA
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| Protein sequence | MARKLVFAAA AFAALTAAAP AFSTEVVRIG TTAGPYAEIL RYAGDLAAKQ GIEVKITEFT
DYTVPNAALA QDDLDINNFQ HQPYLDNQVA QRGYDIVSIA KSIIVPIGIY SNKVKTLTDI
KDGASAAIPN DPSNGARALQ LFEKAGLIKL KPGIGIKATI ADIAENPKHL KIVELDAAQL
PRSLNDLDFS AVNLNYALSA GLDPKSALLL EGADTNWNLV FAVRAKNKDN ATLKKFVEIY
RSPEVKAFTE KRFNGTILTT W
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