| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1534 |
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| Symbol | |
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| ID | 6409191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1621057 |
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| End bp | 1622082 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711428 |
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| Product | cytochrome bd ubiquinol oxidase subunit II |
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| Protein accession | YP_001990543 |
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| Protein GI | 192289938 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.179165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGA TGGCGAACTT CGACTTTGCG GCCTTCTTCG CTGTCAGCGC GGCGATCGTT
GTCGGGCTCT ATGTTGTACT CGATGGCGTT GACCTCGGCG TCGGCATCCT GTTTCCGTTC
GCGCCGCGCT CGTCGGATCG CGACGCGATG ATGACGACGC TGGAGCCGTT CTGGGACGGC
AACGAGACCT GGCTGGTGCT GGGCGGCATG GTGCTGCTGG CCGCCTTTCC CCTGGCGTTC
GCAATCCTGT TGCCGGCGTT CTACGTGCCG CTCTGCCTGA TGCTGTTCGG GCTGGTGATC
CGTGGCATTG CGTTCGAATT CCGCTCGCAG CGCGGATCAT TCGAGATCGT GTGGTCGATG
ACCTTCGCGG CCGGTTCGTT CATCGCCGCG TTCTGCGAGG GAGTCGTTCT CGGAGCCTTT
GTCGGGCAGA GCATCACGGT GTCGAACGGC GCATTCGCGG GCGGGCCGTT CGACTGGCTC
GGGCTGTTCT CGATCGCGAC CGGTCTTGGC GTGGTCGCCG CCTATGGTCT GCTGGGCGCC
TGCTGGCTGG TGTGGAAGAC GGGCGGCTCG ACGCAGAACT TCGGCCGCGA GCTGATGTTG
CCGACGCTGC TGTGCGCCGG CGGCGCGATC CTGCTCGTCA GCGTCTGGAC GCCTTTCGTC
AAGCCGCAGA TCGCCGAACG CTGGTTCGTA TGGCCGGACA TGCTGTGGCT GGCACCGCTG
CCGATCATCG CGGTCTTGGC TGGGATCGGC ATTCTTCTGA CGCGCTGGAG CGAACGTGAG
TGGTCACCGT TGGCCTTGTC CCTGCTGCTG TTCATCACGT CGCTGGCCGG GCTCGGCGCC
AGCGTGTGGC CCGAAGCCAT TCCGGGCGTG ATGACGATCT GGCAGGCGTC GTCGATGCAC
CGGACGCAGG TCATCGTCGC TGCCGCCATC GTGATCATCG TGCCGATCAT CCTCGCCTAT
ATCGGCTACG GTTACTGGCT GTTCCGCGGC AAGACCAAGC CGGTGCCGGA ATTTCCGGAG
AGCTGA
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| Protein sequence | MSMMANFDFA AFFAVSAAIV VGLYVVLDGV DLGVGILFPF APRSSDRDAM MTTLEPFWDG
NETWLVLGGM VLLAAFPLAF AILLPAFYVP LCLMLFGLVI RGIAFEFRSQ RGSFEIVWSM
TFAAGSFIAA FCEGVVLGAF VGQSITVSNG AFAGGPFDWL GLFSIATGLG VVAAYGLLGA
CWLVWKTGGS TQNFGRELML PTLLCAGGAI LLVSVWTPFV KPQIAERWFV WPDMLWLAPL
PIIAVLAGIG ILLTRWSERE WSPLALSLLL FITSLAGLGA SVWPEAIPGV MTIWQASSMH
RTQVIVAAAI VIIVPIILAY IGYGYWLFRG KTKPVPEFPE S
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