| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1530 |
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| Symbol | |
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| ID | 6409187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1613699 |
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| End bp | 1614874 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711424 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001990539 |
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| Protein GI | 192289934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAT CTGTCATTCT CGCTTCCACG CTGGCCGGAG CTGCGCTTGC GGCGAGCCTT
TGGTACATCC GACAAGACGA GTCCCTCGCC GCATCAGCCG TGGTGCGGGT GCCGAGCGCA
GCGGTACCGG TGATTACCGC GAGGGTTGCT CGCAGCGATG TGCCGGTCTA TTTGCGCGGC
ATCGGGACCG TCGTCGCCTA CAACACCGAT GTGGTCCGCA GTCAGATCCA GGGCCAGCTC
ACTGCGATCG ATTTCACTGA AGGGCAATTC GTCAAAGCCG GCGATATGCT GGCGCAGATC
GATCCGCGTC CCTATCAGGC GCAGATCGCA CAGCTGACCG CCAATCGCGA CCGCGACGTT
GCGCACCTCG CCAACGCGAA GGCTAACCTC GATCGAGATA CTCAGCTGGG CGACAAGGGC
TTCGCCAGCA CCCAGGCGAT CGAGACCCAG CAGGCGAAGG TCTCTCAGCT TCAGGCGGCC
GTGGAGGCCG ACCAGGCGGC GATCGATCAG GCCAACGTTC AGCTCGGCTA CACCCGCCTG
ACCTCGCCGA TCCCCGGCAT CACTGGCGTT CGGCAAATCG ATATCGGCAA TATCATTCAT
ACGACCGATC CCAACGGTTT GGTGGTGGTG ACCCAGATCG AGCCGATCTC CGTCCTGTTC
GCGTTACCTG AAGCCGATCT ACCGCGGATT CAGACTCAGA TGGCAAAGGG CTCTCTCCCA
GTGATCGCCT ATACTCAAGA CGGCCGGACC AGGCTTGACG AAGGCAAGCT TCTGCTCGTC
AACAACCAGA TCGACCAGGC GACCGGCACC GTGCAGCTCA AAGCGGAGTT CGCCAACACC
GAGCATCGGC TCTGGCCAGG CCAGCTGATC ACCGTCAATC TGCTGCTGAC GACGCGAAAG
AATGCCGTCA CCGTCGCGGG CTCCGCCGTG CAGCAGGGGC CGAATGGCTC CTACATCTTC
GTGGTCTCGC CGTCGGGAAC CGCCGAGATG CGGCCTGTGA CAGTCGGTCA AATCAGCCGT
GGACAGGCGT TGATAGACTC CGGCCTCGCC GGCGACGAGA CGGTGGTGGT CGACGGCCAA
TATCGACTGC AGCAAGGCAG CCGCGTCGAG CCGCTGCACG GCAAGGCGGC GCAGGAAGCG
GATCTGCAGA GCGCAGTCCA GGACGCGCTG CCGTGA
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| Protein sequence | MRKSVILAST LAGAALAASL WYIRQDESLA ASAVVRVPSA AVPVITARVA RSDVPVYLRG
IGTVVAYNTD VVRSQIQGQL TAIDFTEGQF VKAGDMLAQI DPRPYQAQIA QLTANRDRDV
AHLANAKANL DRDTQLGDKG FASTQAIETQ QAKVSQLQAA VEADQAAIDQ ANVQLGYTRL
TSPIPGITGV RQIDIGNIIH TTDPNGLVVV TQIEPISVLF ALPEADLPRI QTQMAKGSLP
VIAYTQDGRT RLDEGKLLLV NNQIDQATGT VQLKAEFANT EHRLWPGQLI TVNLLLTTRK
NAVTVAGSAV QQGPNGSYIF VVSPSGTAEM RPVTVGQISR GQALIDSGLA GDETVVVDGQ
YRLQQGSRVE PLHGKAAQEA DLQSAVQDAL P
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