| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1529 |
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| Symbol | |
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| ID | 6409186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1610550 |
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| End bp | 1613702 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711423 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001990538 |
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| Protein GI | 192289933 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCTCT CGGCCCCCTT CATCAGCCGA CCGATCGCGA CCTCGCTGCT GATGCTCGGC
CTGCTGCTGT GCGGCCTCGC GACTTATCGA CTTCTCCCTG TCGGAGCTCT GCCGAACGTC
AATTATCCGA CCATCCAGAT CTCTGCGCAG CTGCCAGGCG CCGATCCGCA GACCATCGCC
TCGTCGATCG CGACGCCGCT GGAGCAACAG CTCAGCCAGA TTCCAGGCGT GGTCCAAATG
ACATCGTCGA GCGCCCTTGG GGTCGCCCAG CTGATCGTGC AGTTCGACCT GTCGCGCACT
GTCGACAGCG CGGCAGTCGA CGTGCTGGCC GCGATCAACG CGGCGAGTCC GTTCCTGCCG
CCGAATATTC CGTATCCGCC GACGATCCGG AAGGTGAACC CGGCGGAGAC GCCGGTGATG
CTGCTGGCGC TGACATCCGA CAGTCTGCCG CTCACCACCG TCGACGCCTT TGCGGAAAAC
ATCCTGCTGC CGAAGATTTC GCAGATCCCC GGCGTCGGGC TGGTCGGCAT CGGCGGCCAG
CAGAAGCCGG CGATCCGCAT CCAGGTCGAT CCGGAAGCGC TGGCTGCCCG CGGCCTGAGC
CTCGAGGAGG TCCGCAGCGT CGTCGCCGGT GCCAATGTCG ATCTGCCCAA GGGCACGCTC
AACAGCCCGC GCGTCACCTA CACGCTCAAC ACCAACGACC AGCTGCTCAA GCCCGATCAA
TACGACTCGC TGATCATCGC CTATCGCAAC GGCTCGCCGG TGCGAATCCG CGACATCGGC
AAGGCGGTGG AAGGGCCGGA GAACGATCTG CTGGCGGGCT GGTACAACAA GGATCGCGCC
ATCATCCTGG CTGTCCAGCG CGTGCCCGGC GCGAATGTAA TCGCCACAGT GGACCGGATC
AAGGCGCTGC TACCTCAATT GCAAGCCTCG CTGCCGCCGG CCATCAAGGT GACGATCGCC
GCCGACCGGA CGCAGACGAT CCGCGCCGCG GTCTCGGACG TGCAGCACAC GCTGCTGCTG
ACCATCGGCC TGGTCGTCAT GGTGATCTTC CTGTTCCTGC GCAACATCTG GGCGACGGTG
ATCCCAGCGG TGACCGTGCC GCTGTCGCTG GTCGGCAGCT TCGCGGTGCT CTATCTGCTC
GGCTACAGCC TCGACAATCT GTCGCTGATG GCGCTGTCGA TCGCCGTCGG TTTCGTCGTC
GACGACGCAG TCGTGGTGAT CGAGAACATC GTCCGCCACA TCGAGAACGG CCTCAGCCCG
ATGCAGGCGG CGATTAAGGG ATCTGCCGAG ATCGGTTTCA CCATCGTGTC GATTACGCTG
TCGCTGATCG CGGTGTTCAT CCCGCTGTTC CTGATGGGCG GCTATGTCGG CAAGCTGTTC
CAGGAATTCG CCATCACCAT CACCGCCTCG CTGATCCTGT CGCTGATCAT CTCGCTGACC
TTGACGCCGA TGATGTGCGC CCGGCTTTTG AAGGACGAGA CCCACAAGCG GCACGGACGG
ATCTACCTGG TCGTCGAGCG GGCGTTCGAG TCGCTGCTGG CGCTGTACGC ACGCGGACTG
CGCGTCGTGC TGCGGCATCG CTTCGCCACG CTGATGGTGA TGCTCTCCAC CATCGCGCTG
ACCGGCTACC TCTATGTCGT GATACCCAAG GGCTTCTTCC CGCAGGAAGA CACCGGGCAG
ATCGTCGGCA TCACCGAAGC CGCGCAGGAC ATTTCGTTTC CGGCGATGTC CGAGCGCCAG
CAGGCGGTCG TCGGCGTGCT GCTGAAGGAC CCGGCGGTGC AATCGGTCGC CAGCTACATC
GGACCGGGCG GCCCGACCGC GACGCTGAAC CAGGGCCGCA TCTTCATCAT CCTGAAGCCG
CGGGAGCAGC GCGACGTCAG CGCCGGCCAG ATCATCGCCC GATTGAAGCC GGAACTGGCT
CGCATCCAGG GCATCGAGCT CTACCTGCAG TCGGCCCAGG ACATCACCAT CGGAGCCCGG
TTGTCGAAGA CGCAGTATCA GTACACGCTC ACCGACGCGG ATTCCGCCGA GCTTGCGCAC
TGGGCTGCGA TCTATCTCGA CAAGCTCAAG CAGATCCCCG GCATCACCGA CGTGGCCAGC
GACCAGGCCA ACGCCGGGCC GCGGCTCGAC ATCACGGTCG ACCGGCAGGT GGCGTCGAGC
TTCGGCATCC TACCCGCCAC GATCGACAAC ACGCTGGACG ACGCCTTCGG CCAGCGCATC
GTCTCGACGA TGTTCACTTC GCTGAACCAG TATCACGTCA TCCTGGAAGT CGATCCGCGC
TACCAATACG GCCCCGATGC GCTGCAGAAA ATCTATGTGC CGTCGTCCAG CGGCCAGCAG
GTTCCGCTCA GGACGCTGGT GACGAGCAAG ATCGTGCCGA GCCCGATCCT GGTCAATCAC
CAGAGCATGT TCCCCTCTGT GACGGTGTCG TTCAATCTAC GGCCCGGCAT CGCGCTCGGC
GACGCCGTGG CGGCGATCCA GGCTTTCGAG AAGGCATCCG GCAAGCCGGG TTCGCTGGCG
ACCTCGTTCC AGGGCAACGC CCAGGCGTTT CAATCGTCCC TGACCGGCAC GCCGCTGCTG
ATCGGCGTGG CGCTGATCGT GATCTACATC ATCCTCGGCG TACTGTACGA GAGCCTGATC
CACCCGATCA CGATCCTCTC GACCTTGCCG TCGGCCGGCA TCGGCGCGTT GCTGTTGCTG
ATGGTCGTGA AGATGGATCT CAGCGTGATC GCACTGATCG GCATCATCCT GTTGATCGGC
ATCGTCAAGA AGAACGGCAT CATGATGGTC GACTTCGCGC TCGACGTCCG GCGCACCCAA
GGGCTGTCGG CACAGGAGGC GATCTATCAG GCCTGCACCT TGCGGTTCCG GCCGATCCTG
ATGACGACGA CAGCGGCAAT CCTGGGTGGA CTGCCGCTGA TGCTGGGCAG CGGCACCGGA
TCGGAGCTGC GGCAGCCGCT CGGCTACACC ATCGTCGGCG GACTTCTACT GTCACAGGTC
CTGACGCTGT ACACGACGCC CGTCGTCTAT CTCTATCTCG ACGCACTCGG CGACCGCATC
GCGCGGTGGC GATCGCGCGC GGGCGCCCCG CACACAACCC CACCGGCACC GCCGATCGAG
AACGCCAGCC CATCTGCATC GACGAACATG TGA
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| Protein sequence | MNLSAPFISR PIATSLLMLG LLLCGLATYR LLPVGALPNV NYPTIQISAQ LPGADPQTIA
SSIATPLEQQ LSQIPGVVQM TSSSALGVAQ LIVQFDLSRT VDSAAVDVLA AINAASPFLP
PNIPYPPTIR KVNPAETPVM LLALTSDSLP LTTVDAFAEN ILLPKISQIP GVGLVGIGGQ
QKPAIRIQVD PEALAARGLS LEEVRSVVAG ANVDLPKGTL NSPRVTYTLN TNDQLLKPDQ
YDSLIIAYRN GSPVRIRDIG KAVEGPENDL LAGWYNKDRA IILAVQRVPG ANVIATVDRI
KALLPQLQAS LPPAIKVTIA ADRTQTIRAA VSDVQHTLLL TIGLVVMVIF LFLRNIWATV
IPAVTVPLSL VGSFAVLYLL GYSLDNLSLM ALSIAVGFVV DDAVVVIENI VRHIENGLSP
MQAAIKGSAE IGFTIVSITL SLIAVFIPLF LMGGYVGKLF QEFAITITAS LILSLIISLT
LTPMMCARLL KDETHKRHGR IYLVVERAFE SLLALYARGL RVVLRHRFAT LMVMLSTIAL
TGYLYVVIPK GFFPQEDTGQ IVGITEAAQD ISFPAMSERQ QAVVGVLLKD PAVQSVASYI
GPGGPTATLN QGRIFIILKP REQRDVSAGQ IIARLKPELA RIQGIELYLQ SAQDITIGAR
LSKTQYQYTL TDADSAELAH WAAIYLDKLK QIPGITDVAS DQANAGPRLD ITVDRQVASS
FGILPATIDN TLDDAFGQRI VSTMFTSLNQ YHVILEVDPR YQYGPDALQK IYVPSSSGQQ
VPLRTLVTSK IVPSPILVNH QSMFPSVTVS FNLRPGIALG DAVAAIQAFE KASGKPGSLA
TSFQGNAQAF QSSLTGTPLL IGVALIVIYI ILGVLYESLI HPITILSTLP SAGIGALLLL
MVVKMDLSVI ALIGIILLIG IVKKNGIMMV DFALDVRRTQ GLSAQEAIYQ ACTLRFRPIL
MTTTAAILGG LPLMLGSGTG SELRQPLGYT IVGGLLLSQV LTLYTTPVVY LYLDALGDRI
ARWRSRAGAP HTTPPAPPIE NASPSASTNM
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