Gene Rpal_1480 details

Gene Information

• Locus tag: Rpal_1480
• Symbol: dnaG
• ID: 6409137
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1559930
• End bp: 1561939
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 642711379
• Product: DNA primase
• Protein accession: YP_001990495
• Protein GI: 192289890
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCTTCT CGCCGCAGTT CCTCGATGAT CTGAAAGCCC GGCTGTCGGT GTCGGAGGTG 
GTCGGCCGCC GCGTCAAGCT GAAGAAGGCG GGGCGGGAGT GGAAGGGGCT GTCGCCGTTC 
CAGCAGGAGA AGACGCCGTC GTTTTTCGTC AATGACGAGA AGCAGGCGTG GTTCGACTTT 
TCCTCGGGCA AGAACGGCTC GATCTTCGAC TTCGTGATGC TGACCGAGGG CGTCGACTTC 
CCCGAAGCCG TGGAGCGGCT GGCGGCGATG GCCGGCGTGG CGCTGCCGGT GCAGTCGCCG 
GATTCGGCGC GGCAGGAACA GCGCCGTAAA TCGCTATACG ACGTGATGGA GCTGGCGGCG 
AACTACTTCG CCGAGAATCT TGCCTCACGT GCCGGCGCCC GTGCTCGCGG TTATCTCGCC 
GATCGCGCGA TTTTGCCGGG CACGCAGGTC AAGTTCCGGC TCGGCTACGC ATCGAACGAG 
CGCTACGCAC TGAAGGAGCA TCTCGGCAAG CACGGCGTGC CGGTGTCCGA CATGATCGAA 
GCGGGGCTGT TGTCGGCGGG CCCTGATATT CCGGTGCCGT TCGACAAATT CCGCGACCGC 
GTGATGTTTC CGATCACCGA TCTGCGCGGC CGGGTGATCG CGTTCGGCGG ACGCGCGCTG 
GAGAAGGACG TTTCGGCGAA GTATCTGAAC TCGCCCGAGA CGCCGCTGTT TCACAAGGGC 
GACAATCTCT ACAACCACGC GCCCGCACGC AAAGCCGCGC ATGACGGCGG CGCGGTGATC 
GTGGTCGAGG GCTATGTCGA CGTCATCGCG CTGGTCACCG CTGGTTTCCC CGCAACCGTC 
GCGCCGCTCG GTACCGCGCT GACCGAGGCG CAGCTGCAGC ACCTTTGGAA AATGGCCGAC 
GAGCCGATCC TGTGCTTCGA CGGCGACCGC GCCGGCCAGA AGGCGGCATA TCGCGCCGCC 
GATCTGGCGT TGCCGCATCT GAAGCCTGGG AAGAGTCTGC GCTTTGCGTT GCTCCCTGAA 
GGGCAGGACC CCGACGATCT CGCCCGCGCC GGCGGCCGGC TGGCGGTCGA GGAGGTGATC 
GGCGCGGCGC GTCCGCTCGC CGACATGCTG TGGGCGCGCG AGGTCGAAGG CGGCCTGTTC 
GCCACGCCCG AGCGCCGGGC GGCGCTGGAG GCGCGGATCA ACGAGCTGTC GAACGGTATC 
CAGGACGAGG TGGTGCGGCG CTATTACCGC CAGGATTTGG CTGAACGGCT GCGGGCGGCG 
TTCGCCCCGC CGGGCGGCTA TGGCGGCGGA TTTGGCGGCG GCTTTCGCGG CGGCGGGGGC 
GGCGATTCGG GGAGGCGATT CGCTCCGCGG GACGGTTTTC CACAGAGCGG CGGCCGATTT 
GCCCCGCGCG GCCGTCCGGG ACAACCGGCG CCGATGCTCG GCCGCGGCCC CTACCAGATT 
GCCAGCCCGG ACCTGATTTC GAGCCCGATC ATGCGCGGCC AGCGCTCGGC GATGTCGCGC 
CGCGAGGCCC TGATTCTGAT CTCGCTGCTC AATCACCCCT GGCTGCTCGA CGACCATCTG 
GAGGAAATCG CCGCGCTGGA ATTCGCCCAT CCGGAGGCGC ACCGGCTGCG GGCGGCGATC 
ATCGCCGCCT TCGCCCAGCA TCACCACCGC GGCGACGATC CGGTCGGCCA GGCCGAAAAG 
CTCCGCGCAG ATTTGGTTAA GGCAGGCTTA TCCGAGCAAT TGCAACGGGT TGAGCGGGCG 
ATCACGACCT CGGCGGTGTG GGGGAGCGGG CCGAAAGCGG CGCGCGAGGA CGTCCTTTCG 
ACGTGGCAGC AACTCGTTGC CTTGCATCGA CAATCCCACT CCTTACTTAG GGAATTGAAG 
GATGCCGAGC TGGCTTTGGG TGACGACGGC AGCGAGGCGA ATATGCGGTG GTTGAACGAC 
GTCAAGGCGC GCCTGGCGCA GGTCGAGGGG ACCGAGGCGC TGATCGAGGG ATTCGGCGAA 
TCCTCCGGCC GGTTCCAGCG CAGCGTGTGA 

 

Protein sequence

MRFSPQFLDD LKARLSVSEV VGRRVKLKKA GREWKGLSPF QQEKTPSFFV NDEKQAWFDF 
SSGKNGSIFD FVMLTEGVDF PEAVERLAAM AGVALPVQSP DSARQEQRRK SLYDVMELAA 
NYFAENLASR AGARARGYLA DRAILPGTQV KFRLGYASNE RYALKEHLGK HGVPVSDMIE 
AGLLSAGPDI PVPFDKFRDR VMFPITDLRG RVIAFGGRAL EKDVSAKYLN SPETPLFHKG 
DNLYNHAPAR KAAHDGGAVI VVEGYVDVIA LVTAGFPATV APLGTALTEA QLQHLWKMAD 
EPILCFDGDR AGQKAAYRAA DLALPHLKPG KSLRFALLPE GQDPDDLARA GGRLAVEEVI 
GAARPLADML WAREVEGGLF ATPERRAALE ARINELSNGI QDEVVRRYYR QDLAERLRAA 
FAPPGGYGGG FGGGFRGGGG GDSGRRFAPR DGFPQSGGRF APRGRPGQPA PMLGRGPYQI 
ASPDLISSPI MRGQRSAMSR REALILISLL NHPWLLDDHL EEIAALEFAH PEAHRLRAAI 
IAAFAQHHHR GDDPVGQAEK LRADLVKAGL SEQLQRVERA ITTSAVWGSG PKAAREDVLS 
TWQQLVALHR QSHSLLRELK DAELALGDDG SEANMRWLND VKARLAQVEG TEALIEGFGE 
SSGRFQRSV