| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1461 |
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| Symbol | |
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| ID | 6409118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1544536 |
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| End bp | 1545915 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711360 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_001990476 |
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| Protein GI | 192289871 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.402822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTTC TCATCGTCGG CACCTTGAAG GGCCAGCTCA CCACCGCGAC CAAGATCGCG
ATCGATAACG GCGCGTCTGT CACCCACGCG GCCGACAACG AACAGGCGAT GCGGGTACTG
CGCGGCGGCA AGGGCGCCGA CCTGCTGCTG GCCGATGTCG CGCTCGATAT CCGCGATCTG
GTGATGCGGC TCGAAGCCGA GCACATCCAC GTGCCGATCG TCGCCTGCGG CATCGCCTCC
GATGCCCGCG CTGCGGTCGC GGCGATCCAC GCCGGCGCCA AGGAGTATAT CCCGCTGCCG
CCGGATCCGG AGCTGATCGC CGCGGTGCTG GCGGCGGTGG CCAACGACAG CCGCGAGCTG
GTGTATCGCG ACGAGGCGAT GGCCAAGGTC GTGAAGTTGG CGCAGCAGAT CGCCGGCTCC
GAAGCTTCCG TGATGATCAC CGGCGAGTCC GGCACCGGCA AGGAAGTGCT GGCGCGCTAC
GTCCACAGCC GCTCCAATCG CGCCAAGAAG CCGTTCATCA GCATCAACTG CGCGGCGATC
CCCGAGCACC TCTTGGAATC CGAACTGTTC GGCCACGAGA AGGGCGCCTT CACTGGCGCG
GTGGCGCGCC GTATCGGCAA GTTCGAGGAA GCCAGCGGCG GTACGCTGCT GCTCGACGAA
ATTTCAGAGA TGGACGTGCG GCTGCAGTCC AAGCTGCTGC GTGCCATCCA GGAGCGGGTG
ATCGACCGCG TCGGCGGCAA GAGCCCGGTG CCGGTCGACA TCCGCATCCT TGCCACCTCG
AACCGCAATC TGGCCGAAGC GGTGCGCGAA GGCACGTTCC GCGAAGACCT GCTGTTCCGA
CTCAATGTGG TCAATCTGAA GATCCCGCCG CTGCGCGAGC GGCCGGCCGA CATTCTCGAA
CTGGCGCAGC ACTTCGCCAA GAAATATGCT GATGCCAATG GCGTGCCACT GCGGCCGCTA
TCGGCCGAAG CGCGCCGCGT GCTCACCACC AATCGCTGGC CGGGCAACGT CCGCGAACTC
GAAAACACCA TCCACCGCGC GGTGCTGATG GCGCAGGGCG ACGAGATTGG TCCCGAGGCG
ATCATCACGC CGGACGGCGA CCGGCTCGAT CAGACCAAGA CGCCGCCGGC GGTGGCGCAT
GCGACCTTCG CGGCCGAGCA GGTCACCCGC GCGCTGGTCG GCCGCACCGT GGCGGATGTC
GAACGCGATC TGATCCTGGA GACGTTGAAG CACTGCCTCG GCAACCGCAC CCACGCGGCC
AACATCCTCG GCATTTCGAT CCGAACGCTG CGCAACAAAC TCAATGAATA TGCCGACGGC
GGCCTCCCGA TCCCGCCCGC CGGCGGCGGT GAGCCCCGCG CCTTCGTGCA GATGGGTTGA
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| Protein sequence | MRLLIVGTLK GQLTTATKIA IDNGASVTHA ADNEQAMRVL RGGKGADLLL ADVALDIRDL
VMRLEAEHIH VPIVACGIAS DARAAVAAIH AGAKEYIPLP PDPELIAAVL AAVANDSREL
VYRDEAMAKV VKLAQQIAGS EASVMITGES GTGKEVLARY VHSRSNRAKK PFISINCAAI
PEHLLESELF GHEKGAFTGA VARRIGKFEE ASGGTLLLDE ISEMDVRLQS KLLRAIQERV
IDRVGGKSPV PVDIRILATS NRNLAEAVRE GTFREDLLFR LNVVNLKIPP LRERPADILE
LAQHFAKKYA DANGVPLRPL SAEARRVLTT NRWPGNVREL ENTIHRAVLM AQGDEIGPEA
IITPDGDRLD QTKTPPAVAH ATFAAEQVTR ALVGRTVADV ERDLILETLK HCLGNRTHAA
NILGISIRTL RNKLNEYADG GLPIPPAGGG EPRAFVQMG
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