| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1446 |
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| Symbol | |
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| ID | 6409103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1529135 |
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| End bp | 1529890 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642711345 |
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| Product | urea ABC transporter, ATP-binding protein UrtD |
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| Protein accession | YP_001990461 |
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| Protein GI | 192289856 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.685432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGATCG GCCATCAACC GCCCGAATTC CTGCTCGCCG TGGAAGGGCT CACGGTTTCG
TTCGACGGCT TCAAGGCGGT CAACGATCTG TCCTTCTACG TCGAGGAGAA CGAGATCCGC
GTGATCATCG GCCCCAACGG CGCCGGCAAG ACCACCGTGC TGGATCTGAT CTGCGGCAAG
ACCAAAGCGA CCTCCGGCGC GATCCACTTC CGCGGCAAGG ATCTCACCAA GATGAAGGAG
AACGAGATCG TCCAGGCCGG CGTCGGCCGC AAATTCCAGA CGCCGTCAAT CTACGAGGAC
CTCACGGTGT TCGAGAATCT GGAGATATCC TATCCGCAGG GACGCTCGGT GTTCGGTGCG
CTCGCGTTTC AGCGTACCGC GGCTGTGCGC GAGCGCGTCG AGGAGGTCGC CGAAGCAATC
TTCCTGAAGG ACAAGCTCGG CATGAGCGCC GATCTGCTCA GCCACGGCCA AAAGCAGTGG
CTCGAGATCG GCATGCTGCT GATCCAGGAC CCCGACCTGT TGATGCTCGA CGAGCCGGTC
GCCGGCATGA GCGTGTCCGA GCGCGTCAAG ACCGCCGAGC TGCTCCACAC CATCATCAAA
GACCGCTCGG TGCTGGTGAT CGAGCACGAC ATGAAGTTCG TCGAAGACAT CGCCCACAAG
GTCACCGTGC TGCACCAGGG CCAGATCCTG TCCGAAGGCT CGATGGACAC GGTCAAGAAC
GACCCGAAGG TCATCGAAGT CTATCTCGGC CACTAA
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| Protein sequence | MLIGHQPPEF LLAVEGLTVS FDGFKAVNDL SFYVEENEIR VIIGPNGAGK TTVLDLICGK
TKATSGAIHF RGKDLTKMKE NEIVQAGVGR KFQTPSIYED LTVFENLEIS YPQGRSVFGA
LAFQRTAAVR ERVEEVAEAI FLKDKLGMSA DLLSHGQKQW LEIGMLLIQD PDLLMLDEPV
AGMSVSERVK TAELLHTIIK DRSVLVIEHD MKFVEDIAHK VTVLHQGQIL SEGSMDTVKN
DPKVIEVYLG H
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