Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1445 |
Symbol | |
ID | 6409102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1527973 |
End bp | 1529124 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642711344 |
Product | urea ABC transporter, permease protein UrtC |
Protein accession | YP_001990460 |
Protein GI | 192289855 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGCC CGCGCTTTCT CAGTCGTACC GATCTGCTCG GTCTCGCCGT CCTCGCCTTG CTCCTGGTGG TGATCCTGCC GCTGTCGCTC GACGTGTTCC GCCTCAATCT CGTGGCCAAA TATCTGACCT ACGCCTTCGT GGCGATCGGC CTGGTGCTGT GCTGGGGCTT CGGCGGGATT CTCAGTCTCG GCCAGGGCGT GTTCTTCGGC CTCGGTGGCT ACTGCATGGC GATGTATCTC AAGCTGGAAG CCTCTAGCGT CGAGAACACC AAGATCCAGT CGACGCCTGG CATTCCGGAC TTCATGGACT GGAACCAGAT CACCCAGATC CCGTGGTTCT GGCAGCCGTT CCACAGCCTG ACGATCACCG TGATCGCGAT CCTGGTGGTG CCGGCGGTGT TCGCCTTCCT GATCGGTGCT GCGATGTTCA AGCGCCGGGT GGGCGGCGTG TATTTCGCCA TCATCACCCA GGCGATCGCC GCGATCATGA CCATCCTGAT CATCGGCCAG CAGGGCTACA CCGGCGGCAT CAACGGCATC ACCGACCTGC GTACCTTGAA GGGCTGGGAC ATCCGTCCCG ACCACGCCAA GGTGGTGCTG TACTTCGTCG AAGTCGCGTT CCTGTTCGGC GCGATCCTGC TGGCACTGTT CGTGCGGCAC TCGAAGCTCG GCCGCATTCT GGTGGCGATG CGCGAGAAGG AGGACCGGGT GAGGTTCTCC GGCTACAGCG TCGCCAACTT CAAGATCTTC GCTTTCTGCC TCGCGGCGAT GTTCGCGGCG GTCGGCGGCG CGATGTTCAC ACTCAACGTC GGTTTCATGT CGCCGTCCTT CGTCGGCATC GTGCCGTCGA TCGAAATGGT GATCTACACC GCGGTTGGCG GCCGGCTGTC GATCTTCGGC GCGATCTACG GAACGCTGCT GGTCAACTTC GCCAAGACCT CGCTGTCGGA ATCCTTCCCG CAGCTCTGGC TGTTCGGTCT CGGCGCCTTG TTCATCGCGG TGGTGCTGAT CTTCCCGAAT GGTCTCGCCG GCATCTGGCG CGATTACGTC CAGCCGCTGT TCGACAAGCT GATCTCCAAG CGAAAGCCCG GTTCGGATCC TACAGGTGGC AAGTCGTTCG GCCCGGTGGC CGACGGCGCC CCGGCGGAAT GA
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Protein sequence | MESPRFLSRT DLLGLAVLAL LLVVILPLSL DVFRLNLVAK YLTYAFVAIG LVLCWGFGGI LSLGQGVFFG LGGYCMAMYL KLEASSVENT KIQSTPGIPD FMDWNQITQI PWFWQPFHSL TITVIAILVV PAVFAFLIGA AMFKRRVGGV YFAIITQAIA AIMTILIIGQ QGYTGGINGI TDLRTLKGWD IRPDHAKVVL YFVEVAFLFG AILLALFVRH SKLGRILVAM REKEDRVRFS GYSVANFKIF AFCLAAMFAA VGGAMFTLNV GFMSPSFVGI VPSIEMVIYT AVGGRLSIFG AIYGTLLVNF AKTSLSESFP QLWLFGLGAL FIAVVLIFPN GLAGIWRDYV QPLFDKLISK RKPGSDPTGG KSFGPVADGA PAE
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