| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1344 |
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| Symbol | ubiA |
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| ID | 6409001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1416271 |
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| End bp | 1417221 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711243 |
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| Product | 4-hydroxybenzoate polyprenyltransferase |
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| Protein accession | YP_001990359 |
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| Protein GI | 192289754 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.256325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGAA TTCCGGCCAG CGGCGCGGCC GGGCGGGTCG CCGACTCCAC GGGCAACTGG
GTCGACAACC ATGCGCCGCT GTGGACACGG CCTTATTTGA GGCTGGCACG GTTCGATCGT
CCGATCGGTT CCTGGCTCCT GCTGATGCCG TGCCTGTGGT CGGCGGCGCT CGCCGCCGGC
ATGGCCCACG ACCTCAGTCG CCTGCCGCTG TTCTGCGCGT TGTTCTTCAT CGGCTCGTTC
GTGATGCGCG GCGCCGGCTG CACCTGGAAC GACATCACCG ATCGCGATCT CGACGACAAG
GTCGAGCGCA CCCGTTCGCG GCCGATTCCG GCGGGGCAGG TCACCGCCAA GCAGGCCGCG
GTGTTCATGG TGCTGCTGTG TTTGACCGGC CTCATCGTGC TGCTGCAGTT CAACAGCTTT
GCGATCGCCA CCGGTATCGC GTCGCTGATC ATCGTGGCGG CCTATCCGTT CATGAAGCGG
ATCACCTATT GGCCGCAATT TGTGCTCGGG CTCGCGTTCT CTTGGGGCGC GCTGATGGGC
TTTGCCGGCA CGTTCGAGCG GCTCGATCTG GTGGCGTTCG TGCTCTACGC CGGTTCGATT
GCCTGGGTGA TCGGCTACGA TACGGTGTAC GCGCATCAGG ACGCCGAAGA CGACCTGATG
GTCGGAATCA AGTCGACTGC GCTGCTGTTC GGCGAAAACA CCAAGCTCGC GCTAGTGCTG
CTGTTCGGCC TGGCCGTGAG CCTGATCGGC GTGGCGCTGA AGCTGGCCGA TGCCGGCTGG
CTCGCCTGGG TCGGCTTGGC TGCGTTCGCG GCACATCTGG TACAGCAGAT CGTGCGGCTC
GACATCCACG ACAGCCCGCT GTGCCTGAAG CTGTTCAAGT CGAACCGCGA TGCCGGCCTG
CTGCTGTTCG GCGGTCTGGT GGCAGACGCG GTCTCACGTA GTATGGCGTG A
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| Protein sequence | MSGIPASGAA GRVADSTGNW VDNHAPLWTR PYLRLARFDR PIGSWLLLMP CLWSAALAAG
MAHDLSRLPL FCALFFIGSF VMRGAGCTWN DITDRDLDDK VERTRSRPIP AGQVTAKQAA
VFMVLLCLTG LIVLLQFNSF AIATGIASLI IVAAYPFMKR ITYWPQFVLG LAFSWGALMG
FAGTFERLDL VAFVLYAGSI AWVIGYDTVY AHQDAEDDLM VGIKSTALLF GENTKLALVL
LFGLAVSLIG VALKLADAGW LAWVGLAAFA AHLVQQIVRL DIHDSPLCLK LFKSNRDAGL
LLFGGLVADA VSRSMA
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