Gene Rpal_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1313 
Symbol 
ID6408970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1380973 
End bp1381722 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content57% 
IMG OID642711212 
Producthypothetical protein 
Protein accessionYP_001990328 
Protein GI192289723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTCG TACGACCAGC TGAACAGCAA AGCCGGATCG CTGCCCGCAG GGTCGCGCTG 
CTTGAGAAGG TGGACTATCG ACTCGCTGAA ACTCCGGCAG AACGTGAGGC GATCTACCGG 
TTGCGATATC GCGCCTATCT CAAAGAAGGG GCGATCGATG CCAACAGCAG CGGCATCGTT 
ACTGACCGGT ACGATGATCT TCCGAATTCA TGGATCTTCG GCGTGTTCTA TGAGGGGGAG 
CTCAGCAGCT CACTGAGGAT CACAGTTGCA TCTCCGGATC ATCATGACTG CCCATCGATG 
GACGTTTTTC CGGATTTTCT TCAACCCTGG CTTGCTGAGG GTAAAGTCAT CGTGGACCCC 
ACGAGGTTCG TGGCCGATCC GACAAGCGCC AACCGGCTGC CCGAACTGCC ATATCTGACT 
CTGCGTCTGG CTTATGTCTC GTGTGAGTAC TTTAACGCGG ACATCGGCCT CGCTTCGGTG 
AGGACCGAGC ATCAGGCGTT TTATCGTCGG GTGATGATGC GTTCGATTTG TGAATCGCGG 
CCGTATCCAG GATTGAAAAA GCCCATCGGG CTAATGGAGA TCGACTTCCC CGCGATGCAC 
GACAAGCTGT TCGCCCGTTA TCCGTTCTTG CGCTCCAGTG AATCCGAGCG GCGCAGCTTG 
TTCGAACCGG CGACAGGTGT TCCAAATCTG ACTTTGGCCG AGGCTCCAAA TCTCGTGCCG 
ATCGCTCCCC TCGGTCGCAC GTGTCTATGA
 
Protein sequence
MGVVRPAEQQ SRIAARRVAL LEKVDYRLAE TPAEREAIYR LRYRAYLKEG AIDANSSGIV 
TDRYDDLPNS WIFGVFYEGE LSSSLRITVA SPDHHDCPSM DVFPDFLQPW LAEGKVIVDP 
TRFVADPTSA NRLPELPYLT LRLAYVSCEY FNADIGLASV RTEHQAFYRR VMMRSICESR 
PYPGLKKPIG LMEIDFPAMH DKLFARYPFL RSSESERRSL FEPATGVPNL TLAEAPNLVP 
IAPLGRTCL