Gene Rpal_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1283 
Symbol 
ID6408940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1353373 
End bp1354452 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content65% 
IMG OID642711182 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_001990298 
Protein GI192289693 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCACC CGATTCAAGA AGTTCTGCAA GCCTTCGCCG CCGGCGAAAT CGTCGTCGTC 
ACCGATGACG ATGATCGTGA AGGGGAAGGC GATCTGGTGG TCGCCGCCTC GCTGTGCACC 
GCGGAGAAGA TGGCGTTCAT CATCCGCCAC ACCTCGGGCA TCGTCTGCGC CCCGATCACT 
ATGGAAGACG CACGGCGGCT GCGACTCGAC CCGATGGTCG CGCACAACGA CAGCAACCAC 
ACCACCGCCT TCACGGTTTC GATCGACTAC AAGCCGGACA ACGGCACCGG CATTTCGGCG 
GACGAGCGCG CATCGTGCTG CCGCGCGCTC GCCAATCCCA ATGCCGGCGC CGCCGACTTC 
GCGCGCCCCG GCCACATCTT CCCGCTGATC GCGCGTGAGG GCGGGGTGCT GCTGCGCTCG 
GGCCATACCG AGGCTGCGGT CGATCTGTGC AAGCTCGCCG GTTTGCCGCC GGTCGGTGTG 
ATCAGCGAGC TGATGAACGA CGACGGCACC GTGACCAAGG GTGCGCAGGT CGTCGCATTC 
GCCAAGAAGC ACAATCTCAA GCTGGTCACG ATCGCCGACC TGATCGCGCA TCGCCAGGCC 
CGCGAGAAGC TGATCGAGCG CGTCGCCACG TTCCCGGTCG AAAGCCCGAT CGGCGTGATG 
CAGGGCTATG CGTATCGCTC GCCGTTCGAC GAAATCGCCC ACATCGCCTT CGTCTTCAAC 
GGCGTCGGCG ACGGCAAGAA CGTGCTGACC CGGTTCCACA AGCCGAACAT CGTCAAGGAG 
ATCTTCACCG GTCCCCGGCG GATGGAATCG GTATTGGCGC AGTTCAAGAA GAACGGTTCC 
GGCGTGCTGA TCTATCTGCG CGATGGTGCC GCTGGCGTGC CGGTGTCGCC GATCGACGAG 
CAGAAGACCG CCGAAGCCGA CCGGCACCGG CAATGGCGCG AGATCGGCGT CGGTGCGCAG 
ATCCTGCGCG ACCTCGGGGT GACGTCGATC CGGCATCTCA CCACGTCGCA GATCGACTAC 
AAGGGCCTGT CGGGTTTCGG CATCGAAATC GTCGGCAACG AGCACCTTGA AGGCACCTGA
 
Protein sequence
MAHPIQEVLQ AFAAGEIVVV TDDDDREGEG DLVVAASLCT AEKMAFIIRH TSGIVCAPIT 
MEDARRLRLD PMVAHNDSNH TTAFTVSIDY KPDNGTGISA DERASCCRAL ANPNAGAADF 
ARPGHIFPLI AREGGVLLRS GHTEAAVDLC KLAGLPPVGV ISELMNDDGT VTKGAQVVAF 
AKKHNLKLVT IADLIAHRQA REKLIERVAT FPVESPIGVM QGYAYRSPFD EIAHIAFVFN 
GVGDGKNVLT RFHKPNIVKE IFTGPRRMES VLAQFKKNGS GVLIYLRDGA AGVPVSPIDE 
QKTAEADRHR QWREIGVGAQ ILRDLGVTSI RHLTTSQIDY KGLSGFGIEI VGNEHLEGT