| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1268 |
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| Symbol | |
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| ID | 6408924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1341841 |
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| End bp | 1342743 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711166 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001990283 |
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| Protein GI | 192289678 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTCA ATCCCCTCCT TCATGCCGAA CGCGTCACCG GCCGAAGGCA ATCGGCCTTG
ATCGATCTGT GGTCGACCAC GGGATTCGCC GCGGCCGTGA GCGAGGTGAC GGGGCCGCAT
ATTTACGAGT TCGGCGAGCT GCCGGTGCCG ACCGTCGCGA TCACGCTGTA CGACGTGCGC
CGGCACGTTT TGATGGAAAA CGGCAAGGTG CGCCGCGACG CGCCGGTGCG CTCGGGACGG
TTTCGCATCG GCCAGCCGGG CCGACGCGTG GTGGTCGATG CCGTGCCGGA CACCCAGTGG
GGCAAGCTGC TGCTGCTGTA TCTCGGGGAG CCGCTGCTCA AGGAGGTGGG AACCTCGCTC
GGCTCCAGCG GTCCGATCAG CTTGCGCGAC ACCACCTGGG ATGTCGACGA TCCGCTGCTG
GAAGCGTCGG CCAAACGCCT GGTCGAAGCC AGTGATAGCG GCGACCGGCC GAACGCGCTG
CTCGCCGAGC AATTGGCCTA TACGCTCGCG CTGCATCTGA CGGATCGCTA TTCGGCGCCG
CGCAGTGCGC CCGCCGAACT GTCCGCGCCG CTCGAGGCGC CGGTGCGCGA TCGCATCGCC
GAATTCGTTC GTTCCGATCT CGGCGCGCCG ATCACCTTGG CGGCGATGGC GGAGGTCGCG
GGCATGAGCC CGTCCTGCTT CATTCGCAGC TTCAAGCGCT CCACCGGAAT GACGCCGCAT
CGCTTCGTGG TGGAGCAGCG CGTCGCCGCC GCCCGGCGTC TGCTGGAGAC GTCGGACCTG
CCGATCGTCG AGATCGCGCT CGGCGTCGGC TTCTCGTCGC AGTCGCATTT CGGCGTTGCG
TTCCGTCAGG TGACCGGCGA AAGCCCGGCG CGGTATCGCC GGCTGCAGCG CGGCGGCGAG
TAA
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| Protein sequence | MQLNPLLHAE RVTGRRQSAL IDLWSTTGFA AAVSEVTGPH IYEFGELPVP TVAITLYDVR
RHVLMENGKV RRDAPVRSGR FRIGQPGRRV VVDAVPDTQW GKLLLLYLGE PLLKEVGTSL
GSSGPISLRD TTWDVDDPLL EASAKRLVEA SDSGDRPNAL LAEQLAYTLA LHLTDRYSAP
RSAPAELSAP LEAPVRDRIA EFVRSDLGAP ITLAAMAEVA GMSPSCFIRS FKRSTGMTPH
RFVVEQRVAA ARRLLETSDL PIVEIALGVG FSSQSHFGVA FRQVTGESPA RYRRLQRGGE
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