| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1231 |
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| Symbol | |
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| ID | 6408887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1303353 |
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| End bp | 1304252 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642711129 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001990246 |
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| Protein GI | 192289641 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGACG GCTCTGCGAT GACACTGCGC GACGAGGCGC GCGCCAAGGT GAACCTGACG
CTGCGTGTGG TTGGCCGTCG CCCCGACGGC TACCACGAGC TGGAAAGCGT GGTGGCGTTT
GCCGATTGCG CCGATCACCT GACCCTGCAG CCCGGCGCAG CGCTGAGCCT GACCACGATC
GGCCCCGGCG CGCAGGATTG CGGCGACAGC GCCGACAATC TGGTGCTGAA GGCTGCGCGG
CTGCTCGGTG AGCGGGTGCC GGACCTGACA ACCGGCGCCT TCACCCTCGA CAAGCATCTG
CCGGTGGCGG CCGGCATCGG CGGCGGCTCG GCCGACGCTG CCGCAGCGCT GCGGTTGCTT
GCCCGCGCCA ATGATCTCGC CGTTGATGAT CCGCGCCTGG TTGAAGCCGC CCGGCTGACC
GGCGCCGATG TTCCGGTTTG CCTGCCGTCG AAGCCGTGTG TGATGACCGG CGTCGGCGAG
AAGCTGTCGC CGCTGCCGCT GCCGCGGATC CCGGCCGTGA TGGTCAATCC GCGGGTACCG
GTGGCCACCA AGGACGTGTT CACCGCGCTC GGTCTGAAGC CCGGCTCGCT TGCAGTCGGC
GCCACTGACG TCCTCGCTGC ACCGGCTTGG CCGGAAGCCG GCGCGGCGCT CGCCAATTGG
GTCGTGGCGC TTGAGGCCGG CACTAACGAT CTCGAGCCGC CGGCCCTCAA GGTCGAGCCG
GTGGTCGGCA CCGTGCTGGA GGCGCTCCGC GCGACCGCCG GTGTCCAGCT CGCCCGGATG
TCCGGATCGG GCGCGACCTG CTTTGCGCTG TATGCCGATG ATGCTTCAGC CCGCGCTGCT
GCGGACGCGC TCTGCGCCGC GCATCCCGGC TGGTGGGTCC ACGCCGGCAG CCTGAGCTGA
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| Protein sequence | MTDGSAMTLR DEARAKVNLT LRVVGRRPDG YHELESVVAF ADCADHLTLQ PGAALSLTTI
GPGAQDCGDS ADNLVLKAAR LLGERVPDLT TGAFTLDKHL PVAAGIGGGS ADAAAALRLL
ARANDLAVDD PRLVEAARLT GADVPVCLPS KPCVMTGVGE KLSPLPLPRI PAVMVNPRVP
VATKDVFTAL GLKPGSLAVG ATDVLAAPAW PEAGAALANW VVALEAGTND LEPPALKVEP
VVGTVLEALR ATAGVQLARM SGSGATCFAL YADDASARAA ADALCAAHPG WWVHAGSLS
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