| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1229 |
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| Symbol | |
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| ID | 6408885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1299547 |
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| End bp | 1301205 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711127 |
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| Product | Electron-transferring-flavoprotein dehydrogenase |
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| Protein accession | YP_001990244 |
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| Protein GI | 192289639 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATG AAACGCTGCC GCCCCGCGAA TCGATGGAAT TCGACGTCGT GATCGTGGGT
GCAGGCCCGT CGGGACTGTC CGCAGCCATT CGATTGAAGC AGATCAACCC CGAGTTGTCG
GTGGTGGTGG TGGAGAAGGG CTCCGAAGTC GGGGCCCATA TCCTGTCGGG CGCGGTGATC
GATGTTTCGG CGCTCGACCG CCTGATGCCG AGCTGGCGCG AGGACGAGAG CTGCCCGCTG
AAGACCCACG TCGAAGACGA CCACTTCTAC GTCATGACGG CGTCGAAAGC GCTCAAGGTG
CCAAACATCA TGGTGCCGCC GATGCTCGAC AACCATAAGA ATTTCATCGG CTCGCTCGGT
GACCTGTGCC GCTGGCTCGG GCCGAAGGCC GAGGAACTCG GCGTCGAGAT CTATCCCGGC
TTCGCCGCGA CCGAAGTGCT GTACGGCGAC AATGGCGAGG TGCGCGGCGT CGCCACCGGC
GACATGGGTA TCGGCCGCGA CGGCCAGCCG AAGGATTCCT ACACCCGTGG CATGGAATTG
CTCGGCAAGT ACACGCTGTT CGCCGAGGGC GCACGCGGCA GCCTGTCGAA GCAGCTGATC
GCCAACTACA AGCTCGACAA GGATTCCAAT CCGCCGAAGT TCGGCATTGG TCTCAAGGAA
ATCTGGCAGG TCGAGCCGTC CAAACATCGC AAGGGCCGGA TCGCCCACTC GTTCGGCTGG
CCGCTCAGCA ACAATGTCGG CGGCGGCTCG TTCCTGTATC ACTACGGCGA CAACTTGGTG
GCGGTCGGCT TCGTTGTGCA TCTCAACTAC GACGATCCGT ATCTGTCGCC GTTCGAGCAG
TTCCAGAAGT TCAAGACCCA TCCGTCGGTG GCGCCGATCT TCGAGGGTGG CAAGCGCATC
TCCTACGGCG CCCGCGCCAT CACCGAAGGC GGCTATCAGT CGGTGCCGCG TCTGACCTTC
CCGGGTGGCG CGCTGATCGG CTGCGCGGCC GGCTTCGTCA ACGTGCCGCG CATCAAGGGC
GTCCATAACG CGATCGGCTC CGGCATGCTG GCCGCCGAAC ACGTCGCGGC GGCGCTCGCG
GCGGGCCGCT CCAACGACGA GCCGGTGGAC TACGAAAACG CCTGGCGCGA CTCTGGCGTT
GGCAAGGACC TGTTCCGCGT TCGCAACGTC AAGCCGCTGT GGTCGAAGTT CGGCACTGCC
GTCGGCGTCG TGCTGGCCGG CTTCGAAATG TGGTGTTCGA CGTTCGGCTT CTCGGTGTTC
GGCACGCTGT CGCATGGCAA GCCCGACCGC TCGACGCTCG ATCCGGCGAA GTCGCATGAG
CCGCACAAGA ATCCGAAGCC GGATGGCAAG CTGACCTTCG ACCGTTTGTC CTCGGTGTTC
CTGTCGAATA CCAATCACGA GGAAGACCAG CCGGTGCACC TCAAGGTCGC CGATATGCAG
CTGCAGAAGA CGTCGGAGCA CGACGTCTAT GCCGGCCCGT CGGGCCGCTA CTGCCCGGCC
GCGGTGTATG AGTGGGTGGA AGAGCCGACC GGTCCGCGCT TCGTGATCAA CGCGCAGAAC
TGCGTCCACT GCAAAACCTG CGACATCAAG GACCCGAACG GCAACATCAC CTGGGTTCCG
CCGGAAGGCG GCGGCGGCCC GAATTATCAG GGCATGTGA
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| Protein sequence | MSDETLPPRE SMEFDVVIVG AGPSGLSAAI RLKQINPELS VVVVEKGSEV GAHILSGAVI
DVSALDRLMP SWREDESCPL KTHVEDDHFY VMTASKALKV PNIMVPPMLD NHKNFIGSLG
DLCRWLGPKA EELGVEIYPG FAATEVLYGD NGEVRGVATG DMGIGRDGQP KDSYTRGMEL
LGKYTLFAEG ARGSLSKQLI ANYKLDKDSN PPKFGIGLKE IWQVEPSKHR KGRIAHSFGW
PLSNNVGGGS FLYHYGDNLV AVGFVVHLNY DDPYLSPFEQ FQKFKTHPSV APIFEGGKRI
SYGARAITEG GYQSVPRLTF PGGALIGCAA GFVNVPRIKG VHNAIGSGML AAEHVAAALA
AGRSNDEPVD YENAWRDSGV GKDLFRVRNV KPLWSKFGTA VGVVLAGFEM WCSTFGFSVF
GTLSHGKPDR STLDPAKSHE PHKNPKPDGK LTFDRLSSVF LSNTNHEEDQ PVHLKVADMQ
LQKTSEHDVY AGPSGRYCPA AVYEWVEEPT GPRFVINAQN CVHCKTCDIK DPNGNITWVP
PEGGGGPNYQ GM
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