Gene Rpal_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1214 
Symbol 
ID6408870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1285065 
End bp1285718 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID642711112 
ProductDSBA oxidoreductase 
Protein accessionYP_001990229 
Protein GI192289624 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.734825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATCA CCCGACGGTC GGCCGTGACG GCGGCGCTTG CACTGGCTCC GACGCTGGTG 
GCCGCCAAGG CCTGGGCAGC CCCGACCGCG CCGGACGCCG AGGATGTGCT GTCGACCGAT 
GCGGTGTTGT ACGACGCGGA AATTCCGGTT GCGGGCAATC CCAAGGGCGA CATCACCATC 
GTCGAGTGGT CCGACTATCG CTGCCCGTAC TGCAAGAAGG TGGCGCCGGA CCTGACGCAG 
GTGGTGAAGG AGGACGGCAA CATCCGCCTG GTGCTGAAGG ACTGGCCGAT CTTCGGCGGA 
GTATCGGTCG ATGCGGCGAA GATGGTGCTG GCTTCGAAAT ACCAGGGCAA GTTTCTGCAG 
GCGCACGAGG CGCTGATCGG TTCGACCTCG AAGCTGACCG AGACGACGCT GAACGAGACG 
CTTAAGGCCG GCGGGATCGA TGTCGACCGC GCCACCAAGG ATCTCGACGC CAACCGTGCC 
ACGATCGAAG CGATCCTCAA GCGTAACGAC ACTCAGGCGA AGGCATTCGG TTTTCAGGGG 
ACGCCGTCGT TCATCGTCGG CCGCTTCCGC GTGCCCGGCG TGCTCGACGT CGCGCTGTTC 
AAGCAGGCGA TCAAGGACGC CCGCGAGGCC GCGAAGAAGA CCGACAAGAA GTAA
 
Protein sequence
MMITRRSAVT AALALAPTLV AAKAWAAPTA PDAEDVLSTD AVLYDAEIPV AGNPKGDITI 
VEWSDYRCPY CKKVAPDLTQ VVKEDGNIRL VLKDWPIFGG VSVDAAKMVL ASKYQGKFLQ 
AHEALIGSTS KLTETTLNET LKAGGIDVDR ATKDLDANRA TIEAILKRND TQAKAFGFQG 
TPSFIVGRFR VPGVLDVALF KQAIKDAREA AKKTDKK