| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1200 |
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| Symbol | |
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| ID | 6408856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1270012 |
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| End bp | 1270902 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711098 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001990215 |
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| Protein GI | 192289610 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.552147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGCG CACACCGCAA AGCAGCAATT CCGATCTTCG CGCTGTACGG CGAGACGCCG
GCAGCGCCGG TCGACATGCT GCATGTCGAA GCGATCCAGT CGCGCAGCCG GTTGTATCAG
TGGGAGATCG ATGTCCACGC CCACCGCAGC CTGCATCAAA TCCTCTGGAT CGGCTCCGGA
ACGGCGACGA TCGCGCTCGA CGAGCAGCGC GTGCAGCGCG ATGGGCCGGT CGCGGTGATC
GTGCCGCCCG GCGTCGTTCA CGGCTTCAAG TTCTCGCCGC ACACCGAAGG TCAGGTCTTC
ACCTTCAATC CGCACGCGAT GATCGAAGGC GATGTGCCGG CGACCGGCCA GGCGCTCCGC
GATCTGTTCG CCGCCGCCCG CATCCTGGAA TTCGAGCCGG ACGGCGCCGC AACGATGCGG
ATCGACAGAT TGTTCGCCGA GCTCGCCGAT GAATTCGCGA CGCCGGATGC CGGCAACTCG
CCCGTACCGT TGTGGCTCGG CCGCGCCATC GTCTGGCGGT TGGCGCAACA GAGCGAGCGG
CAAGCGCGCT ATGCCGCGCG CGGCGGTGAT CAATTCACCC GCTTCTTGTT GCTGGTGGAG
ACGCATCATT GCGAGCATTG GCCGATCGCG CGCTACGCCG ACGAGCTCGG CATGACGCCT
GAACGCCTCA ACCGTCTGGC GAAAGCCGAG ACCGGCCAGA GCGCGCTCGA CGTGGTCCAT
GCCCGCCTCA CCCGCGAAGC CTGCCGCCGG CTGACGTATA TAGCTGCGCC GATCTCCAAG
CTCGCGTTCG AACTCGGCTT CGAAGACCCT GCTTATTTCT GCCGCTTCTT CAAACGCCGC
ACCGGCCAGA GTCCCCGGGA TTATCGGCGC GTGGTGAGCG AGGAGGCGTA G
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| Protein sequence | MARAHRKAAI PIFALYGETP AAPVDMLHVE AIQSRSRLYQ WEIDVHAHRS LHQILWIGSG
TATIALDEQR VQRDGPVAVI VPPGVVHGFK FSPHTEGQVF TFNPHAMIEG DVPATGQALR
DLFAAARILE FEPDGAATMR IDRLFAELAD EFATPDAGNS PVPLWLGRAI VWRLAQQSER
QARYAARGGD QFTRFLLLVE THHCEHWPIA RYADELGMTP ERLNRLAKAE TGQSALDVVH
ARLTREACRR LTYIAAPISK LAFELGFEDP AYFCRFFKRR TGQSPRDYRR VVSEEA
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