| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1187 |
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| Symbol | |
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| ID | 6408843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1259211 |
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| End bp | 1260356 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711085 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001990202 |
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| Protein GI | 192289597 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATACC GATCGCCCTG GATGACCGAA GAGCTGGACA CGTTCCGCGA CCAGTTTCGC
AAATTCCTCG CCAAGGATCT CGCGCCCCAC AGCGACAAGT GGCGGAAGCA GAAGATGGTC
GATCGCTCGG CCTGGCTGAA GCTCGGCGAA ATGGGCGCGC TGCTGCCCAG CGTTCCGGAA
CAGTACGGCG GGCTCGGCGC CAGCTTCGCC TACGATGCCG CGGTCTATGA GGACATGGAG
AAGATCGTCC CGGACGCGCT GTCCGGCGTC ACCGTGTCGA GCGGCATCGT GGCGCACTAC
ATCCTCAACT ACGGGTCGGA GGAACAGAAG CGGCGTTGGC TACCCGGCAT GGCGCGCGGC
GAGCTGATCG GCGCGATCGC AATGACCGAA CCCGGTACCG GATCTGACCT GCAGAGCGTG
CGCACCACCG CCAAGCTCGA CGGCGACGAC TACGTCATCA ACGGCCAGAA GACCTTCATC
ACCAACGGCC AGAACTGCGA CCTGATCATT GTCGTCGCCC GCACCGGCGG CGCCGGCGCC
AAGGGGCTGT CGCTGATCGT GCTGGAGACC AAGGACAACC CCGGTTTCAA GCGCGGCCGC
AACCTCGACA AGATCGGCCT CCACGCCTCC GACACCTCCG AGCTGTTCTT CGAGAACGCC
CGCACGCCGA AGGAGAACCT GCTCGGCGGA GAGGAAGGCA AAGGCTTCGT GCAGCTGATG
CAGCAGCTGC CGCAAGAGCG GCTGATCATC GCGATCGGCG CGGTGGCGGC GATGGAGCGC
GCGGTCGCGC TGACCTCGGA ATACACGCGG GAGCGCAAGG CGTTCGGCCA ACCGATCATC
GAATTCCAGA ACACCGCTTT CACGCTCGCC GAACGCAAGA CCGAAGCCTT CATCGCGCGT
GTGTTCGTCG ATTACTGCCT GGTCCAGCTG GTCGCCGGCA ATCTCGACGC CGTCACCGCC
TCGATGGCGA AATGGTGGAC GACGCAAAAG CAGGTCGAGA CCGTGGACGA GTGCCTGCAA
CTGCACGGCG GCTACGGCTA CATGCAGGAA TACCCGATCG GCCGGATGTT CATCGACTCG
CGCATTCAGA AGATCTACGG CGGCACCAAC GAGGTCATGA AGCTGCTGAT CGCCCGCTCG
CTGTAA
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| Protein sequence | MEYRSPWMTE ELDTFRDQFR KFLAKDLAPH SDKWRKQKMV DRSAWLKLGE MGALLPSVPE
QYGGLGASFA YDAAVYEDME KIVPDALSGV TVSSGIVAHY ILNYGSEEQK RRWLPGMARG
ELIGAIAMTE PGTGSDLQSV RTTAKLDGDD YVINGQKTFI TNGQNCDLII VVARTGGAGA
KGLSLIVLET KDNPGFKRGR NLDKIGLHAS DTSELFFENA RTPKENLLGG EEGKGFVQLM
QQLPQERLII AIGAVAAMER AVALTSEYTR ERKAFGQPII EFQNTAFTLA ERKTEAFIAR
VFVDYCLVQL VAGNLDAVTA SMAKWWTTQK QVETVDECLQ LHGGYGYMQE YPIGRMFIDS
RIQKIYGGTN EVMKLLIARS L
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