| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1164 |
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| Symbol | |
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| ID | 6408820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1232158 |
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| End bp | 1233267 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642711062 |
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| Product | hydrogenase expression/formation |
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| Protein accession | YP_001990179 |
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| Protein GI | 192289574 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0669591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGG CGCCGGGCGA GGATCGCATC GAGGTCGGAA TCGCCCGCCG CGGCGATCGC
GTCGTTCGGC TCGACATCAC CGCGCGCCGG CCGATCGGCA TCGGCCGGCT GGCGCAAGGC
AAATCCGGCG AGATGATCGT CGCGCTGGTG CCGCGGCTGT TCGCGCTGTG CGCATCGGCG
CAGGGCGTTG CGGCGGCTCA AGCGCTGGCG GCGGCACGCG GCATCTCGCT ATCGCCAGTG
GTCGTTGCGG CACAGGCCAG CGCGGTACTG GCGGAGCGCA TGATCGAGCT ATTGCGCGGC
ACCATGCTGT TGCTCGGCGG CGGTGGATCT CCCGCCCTCA CTCATCAGCT GCGCGATCTG
ATGATTGCCG CGCGGCCGAG CAATCCGGCG GCTCCGCTCG ACGACGAAGC GATCAGCCAC
ATCGCGCAGG GGCTCGAAGC ACTCGGTCTG GCGCCGGGCT CGTTTGCGGA TGCCGCCGCC
TGCCGGCGCT GGCTCGGCTC GGAGTCGCTG CTGGCCGAGC TTCACCGGCC GCTCGCTGCC
GAGGCTGAAT TCGGTGTGGC GGCGGTCGAT CCGCTCACCG CGGCGGATGA TGCCGCGATC
GGCGAGCGAC TAACTGGGCT GGGGCCGTCC TTCGCGGTGC GTCCCGATCT GGCAGGCCGC
GTGCCGGAGA CGGGCGCCTT CGCCCGCAAT GCGCATCACC CGGTTGTCGC CGCGTTCGGC
CCCGGCCTTG GCGGCCGGCT GCTTGCGCGG CTGATCGAGA TCGCCGCGAC GCCTGAGCTA
CTACGCGCGG TGCGGCGCGG GAACGTGGAC ACCGCTGCAG TCGTGCAGAG CGCGCCACTC
GGCGATGGCA TCGGCCTCGC CGCCGTCGAA TGTGCCCGCG GCCGGCTGTA TCAACTGATC
GCGCTCGACG CTGAGGGAGC GATCCGGCAG TTCGAGATCC TGGCTCCAAC CGAGTGGAAT
TTTCATCCCG AAGGTCCGCT CGCCCGCGCG CTGGTCGGGA CGAATCTGCA GGCCAGCGAA
GCCGATCGCC GCCGGGTCGA GCGTCTGGTC GCGGCGTTCG ATCCCTGCGT CGGCTTCGAC
GTTCGTTTCC GCGAGGCTGC CGATGCATGA
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| Protein sequence | MTAAPGEDRI EVGIARRGDR VVRLDITARR PIGIGRLAQG KSGEMIVALV PRLFALCASA
QGVAAAQALA AARGISLSPV VVAAQASAVL AERMIELLRG TMLLLGGGGS PALTHQLRDL
MIAARPSNPA APLDDEAISH IAQGLEALGL APGSFADAAA CRRWLGSESL LAELHRPLAA
EAEFGVAAVD PLTAADDAAI GERLTGLGPS FAVRPDLAGR VPETGAFARN AHHPVVAAFG
PGLGGRLLAR LIEIAATPEL LRAVRRGNVD TAAVVQSAPL GDGIGLAAVE CARGRLYQLI
ALDAEGAIRQ FEILAPTEWN FHPEGPLARA LVGTNLQASE ADRRRVERLV AAFDPCVGFD
VRFREAADA
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