| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1056 |
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| Symbol | |
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| ID | 6408712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1124030 |
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| End bp | 1124449 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710969 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_001990086 |
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| Protein GI | 192289481 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)
[TIGR03166] alternate F1F0 ATPase, F1 subunit epsilon |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGCTCC GCATTGTCAC GCCGCTCTCG GTCGTCGTCG AGGAAGACGG CGTCCTCGTC
GTGCGCGCCG AAGACGCCAC CGGCAGCTTC GGGATATTGC CGGGTCACGC GGACTTCCTC
ACGAACCTCG CGATTTCCGT CGTGAGCTGG AAGAACGGCA ATGGGATCCG GCACTGCTGC
GCGGTGCGCC GTGGCGTCCT CTCGGTCAGC GGCGGGCAGG ACGTCGCCGT GGCGACGCGC
GAGGCGGTGC TTGGGGACGA TCTTGCGACC TTGGGCGAGA CGGTCCTCGC TCGCTTCCGC
GCCGATATCG AGGCCGAACG GACGGAGCAT GTCGAGACCA CACGCCTGCA ACTCAACGCG
ATCCGGCAGA TCATGAGCCA TCTTCGTTCC GACCGACGCG GTGCAAGAAT ATTCTCATGA
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| Protein sequence | MRLRIVTPLS VVVEEDGVLV VRAEDATGSF GILPGHADFL TNLAISVVSW KNGNGIRHCC
AVRRGVLSVS GGQDVAVATR EAVLGDDLAT LGETVLARFR ADIEAERTEH VETTRLQLNA
IRQIMSHLRS DRRGARIFS
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