| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1040 |
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| Symbol | |
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| ID | 6408696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1105025 |
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| End bp | 1106854 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642710955 |
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| Product | multicopper oxidase type 3 |
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| Protein accession | YP_001990072 |
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| Protein GI | 192289467 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.172495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGCCC TTCCCTATGA TTATTTTCTG CTTGGCTGGT TTGCCATAGC GCTAATTTCG
ACGGTTTACG TCGGCTACGA TCAGTTTGCG GGGAATCCCG AGCCCACAGT GATGAAATGG
GCGTTTATCT TGATAACGCT CTATATGGGG CCGTTCGGAC TCTTGCTCTA CGTGCTTGCA
GACAAGGAGC CTCGCCCCGG AGAACACGAA CGGTTCACTT CGCCGCTTTG GAAGCAAGGT
GTCGGCAGCA CCATTCATTG CGTCGCCGGA GACGCGACCG GCATCATTTT GGCCGCGGTA
ACGACCGCGT TGCTCGGATT GCCGATGTGG ATCGACTTGA TCGTTGAGTA TCTGGCCGGA
TTCTCATTCG GGCTCTTCAT CTTCCAGTCT CTGTTCATGA AGCGAATGAT GGGCGGCTCG
TACTGGCAGA ACGTAAAGAT GAGCTTCATG CCCGAATTCA TCAGCATGAA CGCGATGATG
GCCGGAATGG CCCCGACGAT GAGCTTCCTG ATGATGGGGC GTGATATGCG CGCCATGGAC
CCGCTCGAAC TGACGTTCTG GGGCGTAATG TCGCTCGGTG TGATCGTGGG ATTCACGACA
GCCTATCCCT TCAACGTTTG GATGGTGCGC GCCGGCATCA AGCACGGCCT CATGACTGAA
AGATCCAGCG AACACGACGA AGGCGATAAC CGGCAAGGAG ATCATGGCGG CGGAAAGGGA
ATGAAGAGCG AGGCGACCGG GCCGCAACTT GCAGCCTTGG CAGGGGTCAC TGGATTGCTA
CTCATAACCG GAATGGTATG GCCCGGCTTT TTCGTGAATC TGAACCTGAG CGCTCGCGAC
GTGGACGGCG CGATAATGCC GCCCGGCATG ATCAATACGT TCGAACTGCC GGCCGCCGCC
ATGCGCGAAA TGGCGGCGGT GAAGCCTCGG CAGGTGAGAT ACGAGGCGCC GAAGACGGCC
CGCGGCGACC AGGTGCTGCA GCCGCGGCTG GAGAACGGCG TCAAGGTGTT CGATATCGAG
GCTTCCGTGA TCCGCTGGAA CATCCTGCCC GACGTCGCGG TGCAGGCTTA TGCCTACAAC
CGCCAGATAC CCGGGCCTCG GCTGGAGCTC ACGGAGGGCG ACCACGTGAG GATCAACTTC
CGCAACGAGC TGCCGGAGAG TACGACAGTG CATTGGCATG GATTGATCGT GCCGAATGAG
ATGGATGGCC CGGCGAAGAT CACGCAACCT CCGGTGCCAC GGGGCGGATC ATATAGCTAC
GAGTTCACCG TAGGGCAGCA CGGGACGTAT TTCTATCATA GTCATGACCA CCCCGATCGG
CAGCAGGCCC TCGGATTATA TGGCGCGCTT ATCGTTCATC CGAAAGATCC GTCGTCGGAG
GTCAAAGCGG ACCTTGAGTA TACGATCCAA CTTCAGGAGT GGCTGAAACG GGAATGGCTC
ACTTATCCAG CGATGCTGAT GGAAGGAGAG CTACCCAACT ACTTCACGAT CAACGGTAAG
GCTTTCCCGG CGACCGACAC GGTGCAGATG AAGGTTGGGC AGACGATAAA GTTGCGCTTC
ATCGGGACCA ACAACAACTT CGTTCATCCG ATGCACGTAC ACGGTGGCCC CTTCGAAGTC
GTGGCAGTGG ATGGGGTTAC TCTTACCGAA GGCGCCCGCT ACCAGGCCGA CACTGTCAAC
GTCGGTCCGG GGCAAAGATA CGACGTGGTT TGGACCGCCC GCAGGAGCGG GAAGTGGTTG
GTGCATTGTC ATATTCCCCA TCACACCTCG AACAACAATG TCGAGCAAGA AGGGGGCGGC
GGGTTGATGC TGGTCTTGAA CGTTCAGTGA
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| Protein sequence | MIALPYDYFL LGWFAIALIS TVYVGYDQFA GNPEPTVMKW AFILITLYMG PFGLLLYVLA
DKEPRPGEHE RFTSPLWKQG VGSTIHCVAG DATGIILAAV TTALLGLPMW IDLIVEYLAG
FSFGLFIFQS LFMKRMMGGS YWQNVKMSFM PEFISMNAMM AGMAPTMSFL MMGRDMRAMD
PLELTFWGVM SLGVIVGFTT AYPFNVWMVR AGIKHGLMTE RSSEHDEGDN RQGDHGGGKG
MKSEATGPQL AALAGVTGLL LITGMVWPGF FVNLNLSARD VDGAIMPPGM INTFELPAAA
MREMAAVKPR QVRYEAPKTA RGDQVLQPRL ENGVKVFDIE ASVIRWNILP DVAVQAYAYN
RQIPGPRLEL TEGDHVRINF RNELPESTTV HWHGLIVPNE MDGPAKITQP PVPRGGSYSY
EFTVGQHGTY FYHSHDHPDR QQALGLYGAL IVHPKDPSSE VKADLEYTIQ LQEWLKREWL
TYPAMLMEGE LPNYFTINGK AFPATDTVQM KVGQTIKLRF IGTNNNFVHP MHVHGGPFEV
VAVDGVTLTE GARYQADTVN VGPGQRYDVV WTARRSGKWL VHCHIPHHTS NNNVEQEGGG
GLMLVLNVQ
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