Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1002 |
Symbol | |
ID | 6408657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1065421 |
End bp | 1065966 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710916 |
Product | hypothetical protein |
Protein accession | YP_001990034 |
Protein GI | 192289429 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3154] Putative lipid carrier protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGTAT CCAATTCGTC CGTCTCCAGG ATGCCCGCGC CGCTTGCCCT CGCGACGCGG GTGTTGCCGC TGTTGCCACT GCAGGTGTTG CTCGGAATCT GCTTGCGCGA AATTCGCGCG CGCCATCCCC GGATCTTCGA TCGCCTCGGT CCGCACACCG GCAAGCGGTA CGGCCTCGCG CCGACCGATC TGCCGATCGC GTTCGTGCTC GAGCCGCGCC GGATGAATCC GCGGGTTACG GTGGTGCGTA CGCTGCCTAC CAACATCCAC GCGCGGATCG CGGGGCCGCT GTCGGCGCTG ATCGGTATGA CCGACGGCTC CTATGACGGC GACGCGCTGT TCTTCTCGCG CGACATCGAA ATCGACGGCG ACATGGAAGC GGTGGTCGCG CTGCGCAATG CGATCGACGA TTCCCGCGTC GACTTCCTGA AAGAGTCGGT TGCGTGGTTC GGCCCGCTGG CGGCGCCGAT CGAACGGATC TTGCGCAGCC TGGTCGGCGC GCAGCCCGGT TATCGCGAAG AGCTGGGTGT CGGAGGCGGA GGTTAG
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Protein sequence | MLVSNSSVSR MPAPLALATR VLPLLPLQVL LGICLREIRA RHPRIFDRLG PHTGKRYGLA PTDLPIAFVL EPRRMNPRVT VVRTLPTNIH ARIAGPLSAL IGMTDGSYDG DALFFSRDIE IDGDMEAVVA LRNAIDDSRV DFLKESVAWF GPLAAPIERI LRSLVGAQPG YREELGVGGG G
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