Gene Rpal_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1002 
Symbol 
ID6408657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1065421 
End bp1065966 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID642710916 
Producthypothetical protein 
Protein accessionYP_001990034 
Protein GI192289429 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGTAT CCAATTCGTC CGTCTCCAGG ATGCCCGCGC CGCTTGCCCT CGCGACGCGG 
GTGTTGCCGC TGTTGCCACT GCAGGTGTTG CTCGGAATCT GCTTGCGCGA AATTCGCGCG
CGCCATCCCC GGATCTTCGA TCGCCTCGGT CCGCACACCG GCAAGCGGTA CGGCCTCGCG
CCGACCGATC TGCCGATCGC GTTCGTGCTC GAGCCGCGCC GGATGAATCC GCGGGTTACG
GTGGTGCGTA CGCTGCCTAC CAACATCCAC GCGCGGATCG CGGGGCCGCT GTCGGCGCTG
ATCGGTATGA CCGACGGCTC CTATGACGGC GACGCGCTGT TCTTCTCGCG CGACATCGAA
ATCGACGGCG ACATGGAAGC GGTGGTCGCG CTGCGCAATG CGATCGACGA TTCCCGCGTC
GACTTCCTGA AAGAGTCGGT TGCGTGGTTC GGCCCGCTGG CGGCGCCGAT CGAACGGATC
TTGCGCAGCC TGGTCGGCGC GCAGCCCGGT TATCGCGAAG AGCTGGGTGT CGGAGGCGGA
GGTTAG
 
Protein sequence
MLVSNSSVSR MPAPLALATR VLPLLPLQVL LGICLREIRA RHPRIFDRLG PHTGKRYGLA 
PTDLPIAFVL EPRRMNPRVT VVRTLPTNIH ARIAGPLSAL IGMTDGSYDG DALFFSRDIE
IDGDMEAVVA LRNAIDDSRV DFLKESVAWF GPLAAPIERI LRSLVGAQPG YREELGVGGG
G