| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0980 |
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| Symbol | |
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| ID | 6408635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1044447 |
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| End bp | 1045145 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710894 |
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| Product | Pirin domain protein |
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| Protein accession | YP_001990012 |
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| Protein GI | 192289407 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAC TCCGTCCCTT CGACCGGCTC GGCGGCGCCG ACCATGGCTG GCTCAAGGCC
AAGCATCACT TCTCGTTCGC CAGCTACTAC GACCCCAACA ACATGGGTCA CGGCGCCCTA
AGGGTCTGGA ACGACGACGA GATCGCCCCG GATACCGGCT TCCCGCCGCA TCCGCATCGC
GACATGGAGA TCATCACCTA TGTGCGCGAC GGCGCAATCA CCCACCAGGA CTCACTGGGC
AACAAGGGCC GCACCCAAGC CGGCGACGTC CAAGTGATGA GCGCGGGTTC GGGCGTCCGG
CACTCCGAGT ACAACCTCGA GCCGGAGACC ACCCGGATCT TCCAGATCTG GATCGAGCCG
ACGCAAGGCG GCGGCCAGCC GACCTGGGGC TCCAAGCCGT TCCCGAAGGC TGACCGCTCC
GGCAAGCTCG TCACCATCGC GTCGGGCTTT GCGTCCGACA CCGACGCACT GCCGATCCGC
GCCGACGCCC GGGTGCTGGC GACGACGCTG AAGGCCGGCG AGACCGCCAC CTACGACGCT
GAGAAGGCGC GGCACCTGTA TCTGGTCCCG GCCGTCGGCA GCGTCGAAGT CAACGGCGTC
CGCGTCAGCG CGCGCGACGG CGCCGCGATC CACGGCGAGA CCCAGCTCAC CATCACGGCG
CTCGCAGACG CCGAGCTGGT GCTGGTCGAC GCGGCGTGA
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| Protein sequence | MIELRPFDRL GGADHGWLKA KHHFSFASYY DPNNMGHGAL RVWNDDEIAP DTGFPPHPHR
DMEIITYVRD GAITHQDSLG NKGRTQAGDV QVMSAGSGVR HSEYNLEPET TRIFQIWIEP
TQGGGQPTWG SKPFPKADRS GKLVTIASGF ASDTDALPIR ADARVLATTL KAGETATYDA
EKARHLYLVP AVGSVEVNGV RVSARDGAAI HGETQLTITA LADAELVLVD AA
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