| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0942 |
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| Symbol | |
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| ID | 6408596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1001656 |
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| End bp | 1002810 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710856 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001989975 |
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| Protein GI | 192289370 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0338054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCTGT GTGTGAGTCT GTTGGCCGCC GGTCTGTTCG CCGACGCCAC TCTGCATGCG
GCGCTCGCGC ACAATCCGTT CGGGGCGCCG AAAGGGGCTG CGGAGCCGCA GGTCGGTGGC
ATTGTCGGCT GGCTGCTGGC GCAGCAATCG GCGTTCTACA AGCAGATGTC GGCAACGATC
CGCGCCGCCA AGGCCGACGG CAGCGCGGTC TGGACCCTGC TGGCGATCTC GTTCGCCTAC
GGGGTGTTCC ACGCCGCCGG GCCGGGCCAC GGCAAGGCGG TGATCTCGTC CTATCTGGTC
GCCAATGAAG AGACCGCGCG GCGCGGCATC GCGCTGTCGT TCGTGTCGGC GATGCTGCAG
GCGGTGGTCG CGGTGCTGAT CGTCGGCATT TGCGCCTGGC TGCTCAATGC GACGGCGAGC
ACGATGTGCA GCGCCGAGCG CGCGATCGAG ATCGGCAGCT ACGCGCTGAT CGCGCTGTTC
GGCGCGCGGC TGGTCTGGGT CAAAGGCGGC GGCTTCCTGC GCGCCCTGCA GGCCTCGATG
CGCAAGCCGC AACTGGCGAT GGCCGGCGTG CCGGCGGCGC TGGCGGATCA CGACCATCAC
CACCACGATC ACGATCATGG CCACGGCAGG CACGGCCATG CCCACGCCAG CACTGCGCTC
GGCGATCATC AGCACCACCA TCATGACCAT GGGCACGAAC ACGGTCACGC GCATAGCCAC
GCCCATCACG ATCACCACCA TCATCACGGC CCCGGCGAAG CTTGCGACCA TTGCGGTCAT
TCGCACGGAC CGGAACCGAG CGAGCTGGCC GGCCCGGGCG GCTGGCGGCG CGGCCTCGGT
GCGGTGCTGA CGGTCGGCAT CCGCCCGTGC TCCGGTGCCA TCCTGCTGAT GGTGTTTGCA
CTCGCCCAGG GCTTGTTCTG GGCCGGGATC GTCGCCACTT TCGTCATGGC GTTGGGAACC
GCGATCACGG TCGCGACCAT CGCGGTGGCG GCGGTGTCGG CAAAGGGGCT GGCCCGCAAG
CTGGCCGCGC AGCGCGACGG CGGCGGCATG CTGGTGATGC GGGGCCTCGA GTTCGCTGCA
GCCGGTCTGG TGCTGCTGCT GGGCTGTGGG CTTCTCCTAG GATTTGTCGC AGCCGAACGT
GTGACGTGTC TTTAA
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| Protein sequence | MILCVSLLAA GLFADATLHA ALAHNPFGAP KGAAEPQVGG IVGWLLAQQS AFYKQMSATI
RAAKADGSAV WTLLAISFAY GVFHAAGPGH GKAVISSYLV ANEETARRGI ALSFVSAMLQ
AVVAVLIVGI CAWLLNATAS TMCSAERAIE IGSYALIALF GARLVWVKGG GFLRALQASM
RKPQLAMAGV PAALADHDHH HHDHDHGHGR HGHAHASTAL GDHQHHHHDH GHEHGHAHSH
AHHDHHHHHG PGEACDHCGH SHGPEPSELA GPGGWRRGLG AVLTVGIRPC SGAILLMVFA
LAQGLFWAGI VATFVMALGT AITVATIAVA AVSAKGLARK LAAQRDGGGM LVMRGLEFAA
AGLVLLLGCG LLLGFVAAER VTCL
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