Gene Rpal_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0941 
Symbol 
ID6408595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1000847 
End bp1001500 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID642710855 
Productprotein of unknown function DUF1007 
Protein accessionYP_001989974 
Protein GI192289369 
COG category[R] General function prediction only 
COG ID[COG3683] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.049615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGCC TGTTGCGCCG CGCCGCCATC CGCTCCGCGC TGATCGCGGC CGTGCTGGCC 
CTGGTGGGCT TCGGAACCGC CGAGGCCCAT CCGCATGTCT GGGTGACCTC GACCAGCGAG 
CTGGTCTATG CGCCGGACGG CTCGTTCACC GGCGTTCGCC ACGCCTGGGC GTTCGACGAC 
ATGTTCTCGA CCTATGCGCT GCAGGGCATC GAGACCAAGG AGAAGGGCGT CTACAGCCGT 
GAGGAGCTGG CTCCGCTGGC GCAGACCAAT GTCGAGTCGC TGAAGGAATT CGCCTACTTC 
ACCTTCGCCA AGGTCGGCGG CAAGAAGCAG AAATTCGCCG AGCCGGTCGA TTATTATCTG 
TCCTACAAGG ACAACGTGCT GACGCTGCAC TTCTTCCTGC CGCTGAAGAC GCCGGTGAAG 
AGCAACGAGC TGTCGGTCGA GGTGTTCGAT CCGAGCTACT TCATCGACTT CTCGTTCGCC 
GAGAAGAACC CGGTCAGCCT GGTCGGCGCC CCATCCGGCT GCACGATGAA CTTCCAGCGC 
CCGACCGACG GCAGCGCCAC CGCGCAGCGG ATGAGCGAAG ACAACTTCCT GAACGGCGAC 
AACTCCAACT ATGGCGCAAT GTTCGCCAAC AAGATCGCGG TGACCTGCCC ATGA
 
Protein sequence
MIGLLRRAAI RSALIAAVLA LVGFGTAEAH PHVWVTSTSE LVYAPDGSFT GVRHAWAFDD 
MFSTYALQGI ETKEKGVYSR EELAPLAQTN VESLKEFAYF TFAKVGGKKQ KFAEPVDYYL 
SYKDNVLTLH FFLPLKTPVK SNELSVEVFD PSYFIDFSFA EKNPVSLVGA PSGCTMNFQR 
PTDGSATAQR MSEDNFLNGD NSNYGAMFAN KIAVTCP