Gene Rpal_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0916 
Symbol 
ID6408570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp971788 
End bp972411 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID642710830 
ProductDSBA oxidoreductase 
Protein accessionYP_001989949 
Protein GI192289344 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.745875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGCC GGATCGACTA CTACTTCTCG TTTCAATCGC CGTGGGCCTA TATCGGCCAC 
CAGCCGTTGC GCCGGCTGGT CGAGACCTAC GATCTGCGTC TCGCCTATAA GCCGGTCTTA 
CTGACCGGGC TGTTTTCCGA GACCGGCGGT ATGCCGCTGG CGAAGCGCCA TCCGGCGCGG 
CAGCGCTATC GGCTGGTCGA GCTGCAGCGC TGGCGCGACA AGCGCGGGCT CGACTTCAAG 
TTGTGGCCGA AGCACTGGCC GTTCGATGCG CGGCTCGCCG ACGGTGTCGT GATCGCGGCG 
CTCGCCGCGG GACACGATCC CGAACCTTAT CTGCAGCGTG CTTTTGCCGC GGTGTGGGAG 
CGCGAGCTCG ATCTCGCCCA GCCGGCCGTG CTGATCGAGC TGGCCGATGC GGCCGGTCTG 
CCTGGCGAAA AGCTGGTCGC GCATGCCGGT TCGGACCAAA TTCGCGCCGC TTATGAGCAG 
AACCGGCTGG ATGCGATAGC CGCAGACGTG TTCGGTTCGC CCGCTTACGT GCTCGACGGC 
GAGGTGTTCT GGGGACAGGA CCGGATCGAA CTGCTCGAGG ATGCGTTGAA ATCCGGTCGC 
GCCCCGTACC GGCCGACGAA CTGA
 
Protein sequence
MSRRIDYYFS FQSPWAYIGH QPLRRLVETY DLRLAYKPVL LTGLFSETGG MPLAKRHPAR 
QRYRLVELQR WRDKRGLDFK LWPKHWPFDA RLADGVVIAA LAAGHDPEPY LQRAFAAVWE 
RELDLAQPAV LIELADAAGL PGEKLVAHAG SDQIRAAYEQ NRLDAIAADV FGSPAYVLDG 
EVFWGQDRIE LLEDALKSGR APYRPTN