| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0832 |
|---|
| Symbol | |
|---|
| ID | 6408485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 877599 |
|---|
| End bp | 879260 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642710745 |
|---|
| Product | 4-phytase |
|---|
| Protein accession | YP_001989865 |
|---|
| Protein GI | 192289260 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0405616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAATT TTCGTCGTAA CAACCGTCGC GCTGCGCTGC TCGCTCTGTC GATGGCAAGC
GTCTTCATGG TGCCGTCGCT GGCGTCCGCC GAATCGGTGC TGCGCATCGG CATGACGGCC
GCAGACATTC CGCGCACGCT CGGTCAGCCC GATCAGGGCT TCGAAGGTAA CCGCTTCACC
GGGCTGACGA TGTATGACGC CCTGACGATG TGGGATCTGT CGTCGGCAAC CAAAGCGAGC
GTGGTTATCC CCGGCCTCGC CACCGAGTGG AAGGTCGAAG ACGCTGATCA TACAAAGTGG
ATCTTCAAAC TCCGCCCCGG CGTGAAGTTT CACGACGGCA GCGACTTCAA CGCCGACGCC
GTGGTGTGGA ACGTCGATAA GGTGCTCAAC AAAGAAGCAC CGCAATACGA TCCCAGCCAG
ATCGGCGTGA CCGCATCGCG GATGCCGACG CTGGTCTCGG CCAAGAAGAT CGATGACCTG
ACCGTCGAGC TGACGACCAA GGAGCCCGAC AGCTTCCTCC CCATCAACCT CACCAACCTG
TTCATGGCGA GCCCGACCAA GTGGCAGGCG CTGTACGACA AGGCCGAGGG CGCCGACGCC
AAGGCGAAGT CGACCGCCGC TTGGGCCGCG TTCGCCAAGG ATGCGTCGGG CACCGGCCCG
TGGAAGATGG CGAAGTTCAC GCCGCGCGAG CGGCTGGAGC TCACCAAGAA CGACGGTTAC
TGGGACAAGA ACCGCGTGCC GCATGTCGAC CGCATGGTTC TGCTGCCGAT GCCGGAAGCC
AACGCCCGGA CCGCGGCGCT GCTCTCCGGC CAGGTCGATT GGATCGAAGC ACCGGCGCCG
GATGCGGTGA AGGAGATCGA AGGCCGCGGC TTCAAGATCG AGAAGAACGA ACAGCCGCAC
GTCTGGCCGT GGCAATTCTC GCGGATCGAA GGCTCGCCGT GGAACGACAT CCGCGTCCGC
CGCGCCGCCA ATCTGTGTAT CGATCGTGAA GGCATGCGCG ACGGCCTGCT GTCGGGCCTG
ATGGTGCCGG CCACCGGCAC GTTCGAGCCG GGTCACCCCT GGCGCGGCAA GCCGCAGTTC
CAGATCAAGT ACGATCTGCC CGCGGCGCAG AAGCTGATGA AGGAAGCCGG CTTCGGCCCG
AACAAGAAGC TCACCGTCAA GGTGCAGACC TCGGCGTCCG GCTCGGGCCA GATGCTGCCG
CTGCCGATGA ACGAGTATCT GCAGCAGGCA CTGGCGGAGT GTTACTTCGA CGTCAAGCTC
GACGTGATCG AATGGAACAC GCTGTTCACC AATTGGCGCC GCGGCGTCAA GGATCCGTCG
GCGAACGGCT CGGATGCGAT CAACGTCACT TACGCGGCGA TGGACCCGTT CTTCGCGCTG
GTGCGCTTCC TGCAGTCGTC GATGGCGCCG CCGGTGTCGA ACAACTGGGG TTACATCAAC
AACCCGAAGT TCGACGAGCT GGTGAAGAAG GCGCGCACCA CCTTCACCGA CAAGGAGCGT
GACGACGTCC TCGCCGAGCT CAACGCCGCC TCGATCGACG ACGCCGCGTT CCTCTACGTC
GCCCACGACG TCGGACCGCG TGCACTGAGC CCGAAGATCA AGGGCTTCGT GCAGCCGAAG
AGCTGGTTCG TCGACTTCTC CCCGGTGTCG ATCGCGCCGT AA
|
|---|
| Protein sequence | MRNFRRNNRR AALLALSMAS VFMVPSLASA ESVLRIGMTA ADIPRTLGQP DQGFEGNRFT
GLTMYDALTM WDLSSATKAS VVIPGLATEW KVEDADHTKW IFKLRPGVKF HDGSDFNADA
VVWNVDKVLN KEAPQYDPSQ IGVTASRMPT LVSAKKIDDL TVELTTKEPD SFLPINLTNL
FMASPTKWQA LYDKAEGADA KAKSTAAWAA FAKDASGTGP WKMAKFTPRE RLELTKNDGY
WDKNRVPHVD RMVLLPMPEA NARTAALLSG QVDWIEAPAP DAVKEIEGRG FKIEKNEQPH
VWPWQFSRIE GSPWNDIRVR RAANLCIDRE GMRDGLLSGL MVPATGTFEP GHPWRGKPQF
QIKYDLPAAQ KLMKEAGFGP NKKLTVKVQT SASGSGQMLP LPMNEYLQQA LAECYFDVKL
DVIEWNTLFT NWRRGVKDPS ANGSDAINVT YAAMDPFFAL VRFLQSSMAP PVSNNWGYIN
NPKFDELVKK ARTTFTDKER DDVLAELNAA SIDDAAFLYV AHDVGPRALS PKIKGFVQPK
SWFVDFSPVS IAP
|
|---|
| |