| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0721 |
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| Symbol | |
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| ID | 6408374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 756515 |
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| End bp | 757282 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642710636 |
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| Product | 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase |
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| Protein accession | YP_001989756 |
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| Protein GI | 192289151 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | [TIGR03206] 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGGC CGCAGAACAA GACGGCAGTG ATCACGGGTG GCGGCGGCGG CATCGGCGGA
GCGACCTGCC GCCGTTTCGC GCAGGAAGGC GCCAAGGTCG CGGTGTTCGA CCTCAATCTC
GATGCTGCCG AGAAGGTCGC CGGCGCGATC CGCGACGCAG GCGGCACCGC GGAAGCGGTC
CGCTGCGATA TCGCCGACCG CACAAGCGTC GATGCCGCGA TCGCCACGAC CACCGCCAAG
CTCGGACCGG TGGACATTCT GGTCAACAAC GCCGGCTGGG ACATCTTCAA GCCGTTCACC
AAGACCGAGC CGGGCGAATG GGAGCGGCTG ATCGCCATCA ATCTCACTGG CGCGCTGCAC
ATGCACCACG CGGTGTTGCC CGGCATGGTC GAGCGCCGCT ACGGCCGGAT CGTCAACATC
GCCTCCGACG CCGCCCGCGT CGGCTCGTCC GGCGAAGCAG TGTACGCCGC CTGCAAAGGC
GGCCTCGTCG CGTTTTCGAA AACGCTGGCG CGCGAGCACG CCCGCCACGG CATCACCGTC
AACGTCGTCT GCCCGGGACC GACCGACACC GCGCTGCTCG CCGGTGTGAC CTCCGGCGCC
GCCAATCCGG AGAAGCTGAT CGAAGCCTTC ACCAAGGCGA TACCACTCGG CCGGCTCGGC
AAGCCGGATG ATCTCGCCGG CGCGATCGCG TTCTTCGGCA GCGACGACGC CGGCTTCATC
ACCGGGCAGG TGCTGAGCGT CTCCGGCGGC CTGACGATGA ACGGCTGA
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| Protein sequence | MARPQNKTAV ITGGGGGIGG ATCRRFAQEG AKVAVFDLNL DAAEKVAGAI RDAGGTAEAV
RCDIADRTSV DAAIATTTAK LGPVDILVNN AGWDIFKPFT KTEPGEWERL IAINLTGALH
MHHAVLPGMV ERRYGRIVNI ASDAARVGSS GEAVYAACKG GLVAFSKTLA REHARHGITV
NVVCPGPTDT ALLAGVTSGA ANPEKLIEAF TKAIPLGRLG KPDDLAGAIA FFGSDDAGFI
TGQVLSVSGG LTMNG
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