Gene Rpal_0695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0695 
Symbol 
ID6408348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp730910 
End bp733198 
Gene Length2289 bp 
Protein Length762 aa 
Translation table11 
GC content66% 
IMG OID642710610 
Productphage tail tape measure protein, TP901 family 
Protein accessionYP_001989730 
Protein GI192289125 
COG category[S] Function unknown 
COG ID[COG5283] Phage-related tail protein 
TIGRFAM ID[TIGR01760] phage tail tape measure protein, TP901 family, core region 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACC TCGACGTCGC TCTTCGGCTC CGGCTGATCA ATCAGCTCGG CGGCCCTGCC 
AAGGAGGCCA AGCGAGAGCT GGAAGGCGTC GGCGCTGCGG CGAAGAAACT CGACGGCGCC
AAGGCCGACA AGCTCGCCCG CGACATCGCC AAGACCAAAA CCGAGGCGAC TGCAGCCGGC
GCTGCGCTGG AGAAGACCGC GGCCGGCGCC AAGAAGCTCG ATCCGGCCAA GGCCGATCGA
TTGGCGCGCG GTCTCGGCAA GAGCAAGACC GAGGCGCTCG GCAGCGAGCG CGCACTGAGA
CAAGTGGTCA ATGCGCTGCG GCAGCTCGAC GGCACCCGTG CCGAGCGCCT GGTCGCATCG
CTGCGGCGCG CCAACACGGC GGCCGAGAGC CTGGCGCGCA GCCTGCGCCG CGTGCGGACA
GAGGGGCATG GTGTCGGCGG GGATGGGGCC GGCGGCGGGC TGAAGCGGCC GACTGCGAGC
GGCGGCGGCA TGTCGGGCGC ACTGGTCGCC GGAGGCGCTC GCATGCTCGG CGTCGTCGGC
GCCGGCTATC TGGCTTACCG GAGTGCTGCT AACAGCGTTC GCACCGTCGT CGACCAGGAC
AAGGCGTGGG CGGAGGTTCG GAAAAAGGTC GACGGGACGC CTGAGCAGTT GGAGGCGCTC
CAGGTGCAAC TGCGAGCGCA GGCCCGCAAA TACGGCCTGT CTATAGCCGA GATTTTCGAA
CAGGCCGCGG AAGCCGGTGC AGCAGGTATC GAGCGAGAGG ACCTGACCCG GTTCGTCGAA
CTAACCACAC GCGCCTCAGT GGGCTGGGGC ACCACCGCGA GGGAGACCGC CCAGCGCATC
GCTGAAATCA AGGCCGGAAC AAATATGACG CTTCCGGAGA TCGACCAGCT CGCCAACAAG
ATCAGCGCGC TGGGTCTGAA CTCTGCCGCC AAAGAGCGGG ACATTGTGGA GATGTTCCAC
CGCTCGGGCG CCGCCGCGAA GGCGGCCGGC GTGCAGTACG ATGACACGCT GGCCATCCTA
ACAGCGATTA GGTCCTCCGG TATGCAGGAG GAAGTCGCGT CCCGATGGTT CAACGCGTTC
GCCTTCGATA TCGCTGGATC GAACGCCAAA GGTGACAAGG TCAAGGAGGC CTGGAAGAGG
CTCGGCTTTA ATACCAAAGA CCTTGCGCAA GGCATGAAGA CGAACGCGAC TGGCACCATC
ATGAAGGTGT TCGAGGCCAT CAATAAGCTC GAACAAACCA AAAAGGTGGA GGTTTTGTCG
GCCATCTTCG GTCAGGGCTG GCAGGATGAG ACGGCCCGCG CAGCCCAGGC GATCCAGGAG
ATCAAGAAGC AGCTCGACTT TGTTCATGAC CCCGCCAACT GGCAGGGGAA AATGCAGTCC
AGCCTCGATA TCCAGCTCTC CACGGTCGCC AATCATTGGG AGCGGATCAA GACAGCCGCC
ACTGAGGTCG CCAACCAAAT CGACCGGGCA ACGGGTGCTT CGAAGGGCTT CAACTCCGCG
ACGGAGTCGC TGCTGCAGAC CTTCGAAAGG TGGATCGGCA AAGGGCCGGG CGCGGACGGG
AAGAAGCCCG GACCAGAGCA GCCGCGCGCC GACGAGCCGG CCGGCCCGAA GTCTCGCTTT
CCCGGCCGCA TGCAGAGCTA CGAGCACGCC AGGGCGACGC GTGAGGCGTT GCGAGCCCGA
GCTCCGAAGC TCTCGGACTT CTCGGGCCGC AACCAGATGG AGGACTACAA GCGCGCGAAG
GCCAAATACG AGGCCGAGCA GCGCGCGATG CGGCCGGCGC GTGGCCCGAT GACCCCTTTG
CCGGAGGTGC CGAACTATAC GCCGGTGCCG GGTAGCCATC GTTCCGGCAT TCCGCTGCCG
GTGCCGCGGC CGACCGCGCG CAACTACACG CCCGTCCCAC CGGCGGCAGC CGATCAGGCC
GAGACGACGA TGCGCCGGAT CACGCAAGTC GTCACGACTG AAGGCGGTAA GGCGGTCGAG
GCGTCACGAT CGGCCGCCGA GCAAGTTCGG GCGATCTGGA ATTTCTCGGT GTCGCCGCAG
ATTTCGCCTC GGTTCGGCGG CGCAGCTGGC GGAGGTTCGT CCGGCGGCGC GGGCGCCGGC
AGCGGTGGCG CATCGCCGGC CCCGGCGCCG GCAGCGCCGA GTGGCAAGCG CGCGGGGCTC
GGTGGCTCGT TCAACGTCGC CGTCACGGTC AACGGCGCCG GCAAGAACGG CCGCCAGATT
GGCTCGGAGA TCGCCCGCGA GCTGGCCAAG CTCGGCAATA GTTCCTCGTC CCTGTTCGAC
ACGGTGTGA
 
Protein sequence
MSNLDVALRL RLINQLGGPA KEAKRELEGV GAAAKKLDGA KADKLARDIA KTKTEATAAG 
AALEKTAAGA KKLDPAKADR LARGLGKSKT EALGSERALR QVVNALRQLD GTRAERLVAS
LRRANTAAES LARSLRRVRT EGHGVGGDGA GGGLKRPTAS GGGMSGALVA GGARMLGVVG
AGYLAYRSAA NSVRTVVDQD KAWAEVRKKV DGTPEQLEAL QVQLRAQARK YGLSIAEIFE
QAAEAGAAGI EREDLTRFVE LTTRASVGWG TTARETAQRI AEIKAGTNMT LPEIDQLANK
ISALGLNSAA KERDIVEMFH RSGAAAKAAG VQYDDTLAIL TAIRSSGMQE EVASRWFNAF
AFDIAGSNAK GDKVKEAWKR LGFNTKDLAQ GMKTNATGTI MKVFEAINKL EQTKKVEVLS
AIFGQGWQDE TARAAQAIQE IKKQLDFVHD PANWQGKMQS SLDIQLSTVA NHWERIKTAA
TEVANQIDRA TGASKGFNSA TESLLQTFER WIGKGPGADG KKPGPEQPRA DEPAGPKSRF
PGRMQSYEHA RATREALRAR APKLSDFSGR NQMEDYKRAK AKYEAEQRAM RPARGPMTPL
PEVPNYTPVP GSHRSGIPLP VPRPTARNYT PVPPAAADQA ETTMRRITQV VTTEGGKAVE
ASRSAAEQVR AIWNFSVSPQ ISPRFGGAAG GGSSGGAGAG SGGASPAPAP AAPSGKRAGL
GGSFNVAVTV NGAGKNGRQI GSEIARELAK LGNSSSSLFD TV